Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Bcas2
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name BCAS2, pre-mRNA processing factor
Also known as -
Coordinate chr2:205662633-205670514
Strand +
Gene summary Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in centrosome and nuclear speck. Predicted to be part of Prp19 complex and U2-type catalytic step 2 spliceosome. Human ortholog(s) of this gene implicated in breast cancer. Orthologous to human BCAS2 (BCAS2 pre-mRNA processing factor). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Bcas2

Retroname Coord Strand Genomic Region ENSG
Bcas2P1 chr7:74185488-74186413 + Intragenic
N/A UCSC
Bcas2P2 chrX:123399473-123400287 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001106458.2
GAGTACAGTGCCGCGCGATGGCGGGCACGGGCTTGGTAGCGGGGGAGGTGGTAGTGGATGCGCTACCCTACTTTGACCAAGGCTATGAAGCGCCTGGCGTGCGGGAAGCGGCTGCGGCCCTGGTGGAGGAGGAAACGCGCAGATACCGACCTACCAAGAACTACCTGAGCTACCTGACAGCCCCAGATTATTCTGCCTTTGAAACAGACATAATGAGAAATGAGTTTGAAAGACTGGCTGCTCGACAACCAATTGAATTACTCAGCATGAAGCGATATGAACTGCCAGCCCCTTCCTCGGGTCAAAAAAATGACATCACTGCGTGGCAAGACTGTGTAAACAATTCTATGGCCCAGCTGGAGCATCAGGCAGTGCGGATTGAGAATCTGGAACTGATGTCACAGCATGGGTGTAACGCCTGGAAAGTGTACAACGAAAACCTTGTTCACATGATTGAACATGCACAGAAAGAGCTTCAGAAGTTAAGGAAGCATATTCAGGATTTAAACTGGCAGCGCAAGAACATGCAGCTTACAGCTGGGGCTAAGCTGAGAGAAATGGAGTCAAATTGGGTGTCGCTGGTGAGTAAGAACTATGAGATTGAGCGGACTATTGTACAGTTGGAGAACGAGATCTATCAAATCAAGCAGCAGCACGGTGAGGCAAACAAGGAAAACATCCGCCAAGACTTCTGAGGACGTGGGCAGCAAGGAATCGAAGTGAGCTCCACGAGACTCGGCACGGACTTTCTCAAAGCGACTGTTGGTGACTCAGTGTTTAGAGACTGTGGGCTATGTAAACTGTTGTATTGCTTTTGTGTGTGTCTTAGCAAAATAAAGATTGTCAACATGTTGCTATTTTTATAGCTATAAAAACCCGAGTTTTCAAAGTGAGTATGACTTTACAATAATCTTGTCATATTTTGTAGAAGTCTTTTTTTTTTTAAGGCTTCAATTTTTGTAATGAAGCTTCTTTATTTTTAAGGTTTCCAATGTGTTCAGGAAGCTGAGAACCTTGAATTTGTGTTTTGTTGAATAAAGGTCTAAGCATTTGT