Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Pdha1
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name pyruvate dehydrogenase E1 subunit alpha 1
Also known as -
Coordinate chrX:37329779-37343410
Strand +
Gene summary Enables pyruvate dehydrogenase (acetyl-transferring) activity. Involved in acetyl-CoA biosynthetic process from pyruvate. Located in mitochondrion. Part of pyruvate dehydrogenase complex. Used to study pyruvate decarboxylase deficiency. Human ortholog(s) of this gene implicated in pyruvate decarboxylase deficiency. Orthologous to human PDHA1 (pyruvate dehydrogenase E1 subunit alpha 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pdha1

Retroname Coord Strand Genomic Region ENSG
Pdha1P1 chr2:246736896-246737375 - Intergenic
 N/A UCSC
Pdha1P2 chr16:88344448-88347157 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001004072.2
CTGGGTGCCGCGGCTGCCGCGTCAGTCTGCTGCGCTCCATGAGGAAGATGCTTGCCGCTGTGTCCCGCGTGTTGGCAGGCGCTGCGCAGAAGCCGGCAAGCAGAGTGCTGGTAGCTTCCCGTAATTTCGCAAATGATGCTACATTTGAGATTAAGAAATGTGACCTTCATCGTCTAGAAGAGGGCCCTCCAGTCACCACAGTGCTCACCAGAGAGGATGGGCTCAAGTACTACAGGATGATGCAGACCGTGCGCCGGATGGAGCTCAAGGCGGATCAGCTGTATAAGCAGAAAATTATTCGTGGTTTCTGTCACTTGTGTGATGGTCAGGAAGCCTGCTGTGTGGGCCTGGAGGCTGGCATAAACCCCACGGACCATCTCATCACTGCCTATCGAGCCCATGGCTTCACCTTCACTCGGGGCCTGCCTGTCCGAGCAATTCTTGCAGAATTAACAGGACGAAGAGGAGGCTGTGCTAAGGGGAAAGGCGGATCAATGCACATGTACGCCAAGAACTTCTATGGCGGCAACGGTATCGTTGGACCTCAGGTGCCCCTGGGTGCAGGAATTGCTCTGGCCTGCAAGTATAATGGCAAAGATGAGGTCTGTTTGACATTATATGGTGATGGTGCTGCTAACCAGGGTCAGATATTTGAAGCTTACAATATGGCAGCATTGTGGAAATTACCTTGTATTTTCATCTGTGAGAATAACCGCTATGGCATGGGCACATCTGTTGAGAGAGCAGCAGCCAGCACGGATTACTACAAAAGAGGAGATTTCATTCCTGGACTGAGGGTAGATGGAATGGATATCTTGTGTGTCCGAGAGGCAACAAAGTTTGCAGCTGCCTACTGCAGGTCTGGTAAGGGGCCTATCCTGATGGAGCTACAGACTTACCGCTACCATGGACATAGTATGAGTGACCCTGGAGTCAGTTATCGCACTCGAGAAGAAATCCAGGAAGTAAGAAGTAAGAGTGACCCTATTATGCTTCTCAAGGATAGAATGGTGAACAGCAATCTTGCAAGTGTTGAAGAATTAAAGGAGATTGATGTGGAAGTGAGGAAAGAAATCGAGGATGCTGCCCAGTTTGCCACGGCTGATCCGGAGCCGCCATTGGAGGAGCTAGGCTATCATATCTACAGCAGTGACCCACCCTTCGAAGTGCGTGGTGCCAACCAGTGGATCAAGTTTAAGTCAGTCAGTTAATGGGAGAGTATTAGATGGATGGGCGTTTCTCATCCGTTGTAAGAAACTCTTTGTGCTCTCAACTTTGACAGGAAATACCCAGACAACAAAAGTCTTGAAAACATGTAAATTAAGGGAGAGTAAAATTGCATGCAGTTTGTACATTGTTGTATTCGGTGTATTCATGTGAATAAGAGTGTATAGGATTGGAGATGGGTAATGCAGTTTATAACCTTCATCATGTCCTAGGTCAGTTACTAAAAGGAACAACTCTGCCATTTGGTGATGTGATCATAGCTTTGAATGACCTTGTGGAGGCATGCTGGGATTAATGCAAAGCACAGGTTAGAAGTGTATGGTCACCATGAATTGTGGAGGCTGGACTCTGTTTGGCACTGACCGTTATGTCTTTGATCAAAGGCTATATATAATCATGTGTTTTAAAATAAGGGTACTTCAGTCACTTCAAAGGTAAAATAATTTAATTTTCTCCATTTAGACATTTAACAAACACAAAATTGTACTCCCATTCCAAGGCACACTTTTTAACTTTTCACATTTAAGTAATTACACTGGTTTATAAAATACTTAGGCTTTATCTTTCCAGCAACTGCTATAAGGTATGCTGACATTTTAAATACTAGGTCAGGAGAGACATTACTTACAATCCGGTTTATAAACAAGTATGCTCTAAATCACATGTGCTTGAATGAAACGAACAAGGGTCTTTCTGTGTAAACGCAGGATTTGTGTGTGCACTAACAGAAGCTTTAATCGTGAGCAGGTGTAGGGTACTTTTTGCTCATTCTCCCCAGCTTGGCTTATTGTGAGGACTCCTGCATTTGTCTTCTGTGCTGGGAGACTGCATGCCAGAGCCTACAGAGGACACCACCACTGCAAAACAATAATTTTCATAAGAAAAGCAAACTTGAAGCCACCCATCTACTCTTCAAATGTAATCTCTAACTTAAAAGTATGTAACCTTTTCCTAGACATGGTACCATAGGAACACTGGGTGATCTGGGTAGAGGTGTGGGCATTTAAACAATGTAAAGAAAGGTCTGGCACCTCATGCCTTGCCAACCTGAGAAAATGAGCTGTGCTTGCTACAACATAGGAAAGATAAATTTCAAAGATCGGGGAAACTACCAGCATTAAAAATAAAAGTATTCACATAAAAAAGCCCCATTTTATTATTTAAATTGTTTGCAGGCTCTCTTACCGTAGTCTGAGGCACCTTAGGTCTTCCTTAGTGATATCATTGAGAATATCAGAAAGTGTGTAATCTTCTTCAACAATCTGAAAGATTCAACATACATTCAACAACATAAGCAGCTTTTCAACAGTATCATAGGAATCCTTTGATTTAGAAATTTACCTTTTCTATTGTATTTGCATCCACTCCTTGTAGCTGCAACCAGTCTATAAGCTCTCTGTTGGTTCCCAGTCCGTCATGGGGTGGTGGGTTCTCTGTTCCACCTATAAAGATTCCAATTTTGTTTTATTGTATAGTAATGTATAACCATAAAATGCTTCAAAAATAACAAAGTGGATGTAATCATGTATCCAAACAGAAATGTAAATGTGCTGTGAAAAGGAAATGAATTAAACTTGTTTGACCCGC