Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Hnrnpa1
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name heterogeneous nuclear ribonucleoprotein A1
Also known as Hnrpa1|hnRNP A1
Coordinate chr7:144865302-144869931
Strand +
Gene summary Enables nucleic acid binding activity. Involved in several processes, including cellular response to epidermal growth factor stimulus; cellular response to thapsigargin; and cellular response to tunicamycin. Located in cytosol and nucleoplasmic periphery of the nuclear pore complex. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis type 20; inclusion body myopathy with early-onset Paget disease of bone with or without frontotemporal dementia 3; and tropical spastic paraparesis. Orthologous to several human genes including HNRNPA1L2 (heterogeneous nuclear ribonucleoprotein A1 like 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Hnrnpa1

Retroname Coord Strand Genomic Region ENSG
Hnrnpa1P2 chr1:190215677-190216970 - Intragenic
Intragenic
N/A UCSC
Hnrnpa1P4 chr1:36638849-36640654 - Intergenic
N/A UCSC
Hnrnpa1P9 chr2:50771237-50772871 + Intergenic
N/A UCSC
Hnrnpa1P11 chr2:95747138-95747956 - Intergenic
N/A UCSC
Hnrnpa1P12 chr3:154833628-154835337 - Intergenic
N/A UCSC
Hnrnpa1P13 chr3:35748061-35749381 + Intergenic
N/A UCSC
Hnrnpa1P15 chr4:52910881-52911279 + Intergenic
N/A UCSC
Hnrnpa1P16 chr4:87293875-87295553 + Intergenic
N/A UCSC
Hnrnpa1P17 chr5:110735096-110737006 - Intergenic
N/A UCSC
Hnrnpa1P18 chr5:1608404-1609133 + Intergenic
N/A UCSC
Hnrnpa1P19 chr5:55296855-55298365 - Intergenic
N/A UCSC
Hnrnpa1P20 chr5:66200964-66202022 - Intergenic
N/A UCSC
Hnrnpa1P22 chr7:133373950-133374829 - Intragenic
N/A UCSC
Hnrnpa1P23 chr7:139858546-139860188 + Intergenic
N/A UCSC
Hnrnpa1P24 chr7:14643700-14645374 + Intergenic
N/A UCSC
Hnrnpa1P25 chr8:100105756-100107387 + Intergenic
N/A UCSC
Hnrnpa1P26 chr8:15929046-15930281 + Intergenic
N/A UCSC
Hnrnpa1P27 chr8:38092802-38094121 - Intergenic
N/A UCSC
Hnrnpa1P28 chr9:121698771-121700089 + Intergenic
N/A UCSC
Hnrnpa1P30 chr11:27942928-27944674 + Intragenic
N/A UCSC
Hnrnpa1P33 chr14:44790182-44791510 + Intergenic
N/A UCSC
Hnrnpa1P37 chr17:5110523-5111644 - Intergenic
N/A UCSC
Hnrnpa1P38 chr17:71171086-71172324 - Intergenic
N/A UCSC
Hnrnpa1P39 chr20:50665778-50667073 - Intragenic
N/A UCSC
Hnrnpa1P40 chrX:108480210-108480940 - Intragenic
N/A UCSC
Hnrnpa1P41 chrX:115424461-115426126 - Intergenic
N/A UCSC
Hnrnpa1P44 chrX:77440747-77442045 - Intragenic
N/A UCSC
Hnrnpa1P45 chrX:857703-858979 - Intergenic
N/A UCSC
Hnrnpa1P1 chr1:113941635-113943148 - Intergenic
N/A UCSC
Hnrnpa1P3 chr1:30780530-30781604 - Intergenic
N/A UCSC
Hnrnpa1P5 chr1:48386250-48387766 + Intergenic
N/A UCSC
Hnrnpa1P6 chr2:152298540-152300028 - Intergenic
N/A UCSC
Hnrnpa1P7 chr2:169304937-169305646 + Intergenic
N/A UCSC
Hnrnpa1P8 chr2:227110089-227111300 + Intragenic
N/A UCSC
Hnrnpa1P10 chr2:57301255-57302729 + Intragenic
N/A UCSC
Hnrnpa1P14 chr3:39074179-39075852 - Intergenic
N/A UCSC
Hnrnpa1P21 chr6:56469916-56471325 - Intergenic
N/A UCSC
Hnrnpa1P29 chr9:36409319-36411193 + Intergenic
N/A UCSC
Hnrnpa1P31 chr11:57096566-57098433 + Intergenic
N/A UCSC
Hnrnpa1P32 chr13:31752345-31753870 - Intergenic
N/A UCSC
Hnrnpa1P34 chr14:94095002-94095739 - Intergenic
N/A UCSC
Hnrnpa1P35 chr15:6675052-6676227 + Intragenic
N/A UCSC
Hnrnpa1P36 chr17:46322934-46324810 + Intergenic
N/A UCSC
Hnrnpa1P42 chrX:47388915-47390507 - Intergenic
N/A UCSC
Hnrnpa1P43 chrX:73480544-73482052 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_017248.1
CGCTGAACGCTCTCATCATCCTACCGTCATGTCTAAGTCAGAGTCCCCCAAGGAACCGGAACAGCTGCGGAAGCTCTTCATTGGAGGGCTGAGCTTCGAAACAACCGACGAGAGTCTGAGGAGCCATTTTGAGCAATGGGGAACACTCACCGACTGTGTGGTAATGAGAGATCCAAACACCAAAAGATCCAGAGGCTTTGGGTTTGTCACATATGCCACTGTGGAGGAAGTGGATGCTGCCATGAATGCAAGACCACACAAGGTGGATGGAAGAGTTGTGGAACCTAAGAGAGCTGTGTCAAGAGAAGATTCTCAGAGACCAGGTGCCCACTTAACTGTGAAGAAGATCTTTGTTGGCGGTATTAAAGAAGACACTGAAGAACATCACCTACGAGATTATTTTGAGCAGTATGGGAAAATTGAAGTGATTGAAATTATGACTGACAGAGGCAGTGGAAAAAAGAGGGGATTTGCGTTTGTCACCTTTGATGACCATGACTCTGTGGATAAGATTGTTATTCAGAAATACCATACTGTGAATGGCCACAACTGTGAAGTAAGAAAGGCTCTGTCGAAACAAGAGATGGCTAGTGCTTCATCCAGCCAGAGAGGTCGAAGTGGTTCCGGAAACTTtggtggtggtcgtggaggtggtttcggtggCAATGACAATTTTGGTCGAGGAGGGAACTTCAGTGGTCGTGGTGGCTTTGGTGGCAGCCGTGGTGGTGGTGGATATGGTGGCAGTGGGGATGGCTATAATGGATTTGGCAATGATGgaagcaattttggaggtggtggaagctacaatgattttggcaattacaacaaccagtcatcaaattttggaccgatgaaaggaggaaactttggaggcaggagctctggcccttatggtggtggAGGCCAGTACTTTGCTAAACCACGAAACCAAGGTGGCTATGGAGGTTCCagcagcagcagtagctatggcagtggcaggagGTTCTAATTACAGCCAGGAAACAAAGCTTAGCAGGAGAGGAGAGCCAGAGAAGTGACAGGGAAGCTACAGGTTACAACAGATTTGTGAACTCAGCCAAGCACAGTGGTGGCAGGGCCTAGCTGCTACAAAGAAGACATGTTTTAGACAATACTCATGTGTGTGGGCAAAAACTCCAGGACTGTATCTGTGACTAATTGTATAACAGGTTATTTTAGTTTCTGTTCTGTGGAAAGTGTAAAGCATTCCAACGAAGGGTTTTACTGTAGACCTTTTTCACCCATGCTGTTGATTGCTAAATGTAAAAGTCTGATCATGACGCTGAATAAATGTGTCTTTTTTTTTTTTTTTTAATGTGCTGTGTAAAGTTAGTCTACTCTGAAGCCATCTTGGTAAACTTCCCCAACAGTGTGAAGTTAGAATTCCTTCAGGGTGGTGCCAAATTCCATTTGGAATTTATTTATGGTTGCTTGGGTGGAGAAGCCATTGTCTTCAAAAACCTTGGTGTTGCTAAACTGCCAGTTACTGTTGTAACTTAATGAGTTTCACCATTTAAAGGGTCATCCAAGCAAGATCACAATTTGGTTATAAAATGGTTGTTGGCACACCCTATGCAATATCAAAATTGAATAACGGTCTCAGATAAAATAACAGATGGGAATGAAGCTTGTGTATCATCCATTATCATGTGTACTCAATAAACGATTTAATTCTCTTGAATGG
>XM_006242384.1
GGTATAAAACACATTTAAAGACGTGAGTACATTCAAATATAAATTACTGGCTAGCTAGCCAATCAATGTGGTTAAGAATAAGATCCCTTGGGGCGTCAATGACTCAAAGGGGCGGGGACTGAGTAGAACGCCCAAACGGATGCCGTTTCTTAGCAGGGCGTTTTTACAGGCCAATGGTGGGAGGGAACAATTTCAAATCTCCAATAAGACTGAAGCAAGGGCGGAGTCTACCAATGCCGAAAGCGAGGAGGCGGGATAAAAGGGAGAGCAGAAGGTAGGCTGCCGGACACGTTCGCTATCTTATTCCTTTCTGCTCTTTGACGCTGGCGAGGAAGCATCGCTGAACGCTCTCATCATCCTACCGTCATGTCTAAGTCAGAGTCCCCCAAGGAACCGGAACAGCTGCGGAAGCTCTTCATTGGAGGGCTGAGCTTCGAAACAACCGACGAGAGTCTGAGGAGCCATTTTGAGCAATGGGGAACACTCACCGACTGTGTGGTAATGAGAGATCCAAACACCAAAAGATCCAGAGGCTTTGGGTTTGTCACATATGCCACTGTGGAGGAAGTGGATGCTGCCATGAATGCAAGACCACACAAGGTGGATGGAAGAGTTGTGGAACCTAAGAGAGCTGTGTCAAGAGAAGATTCTCAGAGACCAGGTGCCCACTTAACTGTGAAGAAGATCTTTGTTGGCGGTATTAAAGAAGACACTGAAGAACATCACCTACGAGATTATTTTGAGCAGTATGGGAAAATTGAAGTGATTGAAATTATGACTGACAGAGGCAGTGGAAAAAAGAGGGGATTTGCGTTTGTCACCTTTGATGACCATGACTCTGTGGATAAGATTGTTATTCAGAAATACCATACTGTGAATGGCCACAACTGTGAAGTAAGAAAGGCTCTGTCGAAACAAGAGATGGCTAGTGCTTCATCCAGCCAGAGAGGTCGAAGTGGTTCCGGAAACTTtggtggtggtcgtggaggtggtttcggtggCAATGACAATTTTGGTCGAGGAGGGAACTTCAGTGGTCGTGGTGGCTTTGGTGGCAGCCGTGGTGGTGGTGGATATGGTGGCAGTGGGGATGGCTATAATGGATTTGGCAATGATGGTGGTTATGGAGGAGGCGGCCCTGGTTACTCTGGAGGAAGCAGAGGCTATGGAAGTGGTGGACAGGGTTATGGAAACCAGGGCAGTGGCTATGGCGGGAGTGGCAGCTATGACAGCTATAACAACGGAGGAGGCGGAGGCGGCTTTGGCGGTGGTAGTGgaagcaattttggaggtggtggaagctacaatgattttggcaattacaacaaccagtcatcaaattttggaccgatgaaaggaggaaactttggaggcaggagctctggcccttatggtggtggAGGCCAGTACTTTGCTAAACCACGAAACCAAGGTGGCTATGGAGGTTCCagcagcagcagtagctatggcagtggcaggagGTTCTAATTACAGCCAGGAAACAAAGCTTAGCAGGAGAGGAGAGCCAGAGAAGTGACAGGGAAGCTACAGGTTACAACAGATTTGTGAACTCAGCCAAGCACAGTGGTGGCAGGGCCTAGCTGCTACAAAGAAGACATGTTTTAGACAATACTCATGTGTGTGGGCAAAAACTCCAGGACTGTATCTGTGACTAATTGTATAACAGGTTATTTTAGTTTCTGTTCTGTGGAAAGTGTAAAGCATTCCAACGAAGGGTTTTACTGTAGACCTTTTTCACCCATGCTGTTGATTGCTAAATGTAAAAGTCTGATCATGACGCTGAATAAATGTGTCTTTTTTTTTTTTTTTTAATGTGCTGTGTAAAGTTAGTCTACTCTGAAGCCATCTTGGTAAACTTCCCCAACAGTGTGAAGTTAGAATTCCTTCAGGGTGGTGCCAAATTCCATTTGGAATTTATTTATGGTTGCTTGGGTGGAGAAGCCATTGTCTTCAAAAACCTTGGTGTTGCTAAACTGCCAGTTACTGTTGTAACTTAATGAGTTTCACCATTTAAAGGGTCATCCAAGCAAGATCACAATTTGGTTATAAAATGGTTGTTGGCACACCCTATGCAATATCAAAATTGAATAACGGTCTCAGATAAAATAACAGATGGGAATGAAGCTTGTGTATCATCCATTATCATGTGTACTCAATAAACGATTTAATTCTCTTGAA