Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Psma3
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name proteasome 20S subunit alpha 3
Also known as Psma3l
Coordinate chr6:93423029-93444223
Strand +
Gene summary Predicted to enable ubiquitin protein ligase binding activity. Predicted to be involved in proteasomal protein catabolic process and regulation of endopeptidase activity. Located in synapse. Orthologous to human PSMA3 (proteasome 20S subunit alpha 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Psma3

Retroname Coord Strand Genomic Region ENSG
Psma3P1 chr1:220032803-220032974 + Intergenic
 N/A UCSC
Psma3P2 chr8:91296313-91296913 - Intergenic
 N/A UCSC
Psma3P3 chr10:65835089-65835968 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_017280.2
CCATGAGCTCCATTGGCACTGGGTATGACCTGTCAGCCTCTACATTCTCTCCTGATGGAAGAGTTTTCCAAGTTGAATATGCTATGAAGGCTGTGGAAAACAGTAGTACAGCTATTGGGATCAGATGTAAAGATGGTGTTGTGTTTGGGGTAGAAAAACTAGTCCTTTCTAAACTTTATGAAGAAGGCTCCAATAAACGTCTTTTCAATGTTGATCGACATGTTGGAATGGCAGTGGCAGGTTTGTTGGCAGATGCTCGTTCCTTGGCAGACATAGCAAGAGAAGAAGCGTCCAACTTTAGGTCTAACTTTGGCTATAACATTCCTCTAAAACATCTTGCAGACAGAGTGGCCATGTATGTACACGCGTATACACTCTACAGTGCTGTTAGACCTTTTGGCTGCAGTTTCATGTTGGGGTCTTACAGTGTGAATGATGGTGCACAGCTCTATATGATCGATCCATCAGGTGTTTCATATggttactggGGCTGTGCCATTGGCAAAGCCAGGCAAGCTGCAAAGACAGAAATAGAAAAGCTTCAGATGAAGGAAATGACCTGCCGTGATGTAGTTAAAGAAGTTGCAAAAATAATTTACATAGTACATGATGAAGTTAAGGATAAAGCTTTTGAACTAGAGCTCAGCTGGGTTGGTGAATTAACTAAAGGAAGACATGAAATTGTTCCCAAAGACGTAAGAGAGGAAGCAGAGAAATATGCCAAGGAATCTTTGAAGGAAGAAGATGAATCAGATGACGACAATATGTAACATTTCACCATCCTCTGGTGTCCATTTCTGTGACAGTTGCATATGGCTAGCACCATGGATTATATATACCCACTGACCAATTTTCATTAAATTTTGTCTTATAAACATTGTTGGGTAATTGAGGATATCTGCGTTATATTAAAATGTAGATTCATGTTTGATTAGAAATTCTAGGAACTgggcctggagagatggctcagcagttaagagctgctcttccaggggacataggttcaattcccagcacccgcatggcagctcacacctgtttgtaactctagctccaggtctctgacacctagacacagaggtacttgcaggcaaaacaccaatgaatataaaataaaaataaaTGatatatatatttacacatataacaagtatatacaaatatgtatattatacagacacatgtgtgtgtatatacatataaatTCTTGGTGCTATTCTggtgtggtagtatatgtctttaatcctagtactctggaggcagaggcaggtggatctcttgagttcaaggctagtatttaaaaacaaaaacaaatgtagtgcccagactaaggcTGAAAGATTGAGCCCACAAGTCAATTTACAATTCCATTTTGTTTTAACTAGAATTAAAAGAATAATTTTAGAttttttttttctttttttcagagctggggaccgaacccagggccttgcgcttcctaggcaagcgctctaccactaagctaaatccccaaccccTTAGAtttatttttattttttgcatgtttatgtatattacagtgccatgcctggtgctcatggaggtcaaaagaatgctttaatctagaactaaagttatggaggactgtgaatcatgtatgttcgaaactgaacttgggtcctgtgtaagagcaacacgtcctcttaaccactgagccatctctccagcccTCTTTGACTAGAATGATCATATTCTACTGTGGTTCTTGTATAATGTTTTGTTTAATGTAGGGATATCCTGTAACCACTATTGAGGACTAACCTGCCTTTTGTGGAAAATGTGACATATTCTAATTTGACATCAATACAGACAACATTTATTTTCAGACTGCATAAATATCTTATGACTGGAAATTATCTTGATATTGGCACCTGAAACAAAAACTTAAAAGTTCCAAACTGGGCTTAAATATTTCATGTAATAAAATGTTTATAGTACTTATCTGA