Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Psma6
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name proteasome 20S subunit alpha 6
Also known as -
Coordinate chr6:76174460-76205429
Strand +
Gene summary Predicted to enable NF-kappaB binding activity and RNA binding activity. Predicted to be involved in positive regulation of NF-kappaB transcription factor activity and proteasomal protein catabolic process. Located in sarcomere. Human ortholog(s) of this gene implicated in myocardial infarction. Orthologous to human PSMA6 (proteasome 20S subunit alpha 6). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Psma6

Retroname Coord Strand Genomic Region ENSG
Psma6P1 chr4:37365201-37366122 + Intergenic
N/A UCSC
Psma6P2 chr9:103916658-103916850 - Intergenic
N/A UCSC
Psma6P3 chr12:4633687-4634650 + Intergenic
N/A UCSC
Psma6P4 chr13:60220091-60221001 + Intergenic
N/A UCSC
Psma6P5 chr20:18310148-18311004 + Intergenic
N/A UCSC
Psma6P6 chr20:53776027-53776940 - Intergenic
N/A UCSC
Psma6P7 chrX:120032664-120033362 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_017283.3
ggtgtgtgtgtgtgtgtgtgCGCTACGGGGTGTAGACTGTGTCTGAAATAGCGGGAACGCCATGTCCCGTGGTTCCAGCGCCGGTTTTGACCGGCACATTACTATTTTCTCTCCCGAGGGCCGACTCTACCAAGTAGAATATGCTTTTAAGGCTATTAACCAGGGTGGACTTACATCTGTAGCTGTCAGAGGAAAGGACTGCGCAGTTATTGTCACACAGAAGAAAGTACCTGACAAACTACTGGATTCCAGCACCGTGACTCACTTATTCAAGATAACGGAAAACATTGGCTGTGTGATGACAGGAATGACAGCTGACAGCAGATCCCAGGTACAGAGGGCACGCTATGAAGCAGCTAACTGGAAATACAAATATGGCTATGAGATTCCTGTGGACATGCTGTGTAAAAGAATTGCTGATATTTCTCAAGTCTACACACAGAATGCTGAAATGAGGCCACTTGGTTGTTGTATGATTTTAATTGGTATAGATGAAGAGCAAGGCCCTCAAGTGTACAAGTGTGATCCTGCAGGCTACTACTGTGGCTTTAAAGCCACCGCAGCAGGAGTGAAGCAGACAGAGTCAACCAGCTTCCTCGAAAAAAAAGTGAAGAAGAAATTTGATTGGACATTTGAACAGACAGTGGAAACTGCAATCACATGCCTGTCTACTGTTCTGTCGATTGATTTCAAACCTTCAGAAATCGAAGTTGGAGTAGTTACAGTTGAAAATCCTAAATTCAGGATTCTTACAGAAGCAGAGATTGACGCTCACCTTGTGGCTCTAGCAGAGAGAGACTGAACACTCTTATCAGCTTACCAGATCCATGATGCCATGTGCCTATGTGTTTAGTAACAACAAACCGACATCTTAGAGGCCCTGGATTGAAGATGGAAACTCTCCCACTCCTCCTGCCACTGACTGGTTAGGACTCTGTATAAATAAAACAGTGCTTTTGGAAA