Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Psmb3
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name proteasome 20S subunit beta 3
Also known as -
Coordinate chr10:85646646-85653729
Strand +
Gene summary Predicted to enable threonine-type endopeptidase activity. Predicted to be involved in proteasomal protein catabolic process. Predicted to be located in cytoplasm and nucleus. Predicted to be part of proteasome core complex, beta-subunit complex. Orthologous to human PSMB3 (proteasome 20S subunit beta 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Psmb3

Retroname Coord Strand Genomic Region ENSG
Psmb3P1 chr3:104069445-104070102 - Intragenic
N/A UCSC
Psmb3P2 chr3:123996649-123997327 - Intergenic
N/A UCSC
Psmb3P3 chr4:127025075-127025736 - Intergenic
N/A UCSC
Psmb3P4 chr5:63553531-63554192 - Intergenic
N/A UCSC
Psmb3P5 chr7:105630910-105631311 - Intergenic
N/A UCSC
Psmb3P6 chr7:34274055-34274726 + Intergenic
N/A UCSC
Psmb3P7 chr10:37322986-37323659 - Intergenic
N/A UCSC
Psmb3P8 chr11:35391094-35391299 - Intergenic
N/A UCSC
Psmb3P9 chr14:82439623-82440289 + Intergenic
N/A UCSC
Psmb3P10 chr15:6049010-6049700 - Intergenic
N/A UCSC
Psmb3P11 chrX:39154151-39154825 + Intergenic
N/A UCSC
Psmb3P12 chrX:55635395-55636083 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_017285.1
AAAGCCAGAACCGGTTTGTAGGCAGCGCAGTGGAGATCGGGTTCCTATTACAGTGCAATCATGTCTGTTATGTCCTATAATGGAGGGGCCGTCATGGCCATGAAGGGAAAGAACTGTGTGGCCATCGCTGCAGACAGGCGTTTCGGAATCCAGGCCCAAATGGTGACCACGGACTTCCAGAAGATCTTTCCCATGGGTGACAGGCTCTACATAGGCCTGGCCGGCCTGGCCACTGACGTCCAGACAGTTGCCCAGCGTCTCAAGTTCCGACTGAACCTGTACGAGCTGAAGGAAGGACGGCAGATCAAGCCTTACACCCTGATGAGCATGGTGGCCAACCTCTTGTATGAGAAACGGTTTGGTCCCTACTACACAGAACCTGTCATTGCTGGCTTGGACCCGAAGACCTTTAAGCCCTTCATTTGCTCTCTGGACCTCATTGGCTGTCCCATGGTGACAGATGACTTCGTAGTCAGTGGCACCTGCTCTGAACAAATGTATGGGATGTGTGAGTCTCTCTGGGAGCCCAACATGGATCCAGAGCACCTGTTTGAGACCATTTCTCAGGCCATGCTGAATGCTGTGGACAGGGATGCCGTGTCGGGCATGGGCGTCATTGTCCACATCATTGAAAAAGACAAGATCACCACCAGGACACTGAAGGCGCGGATGGACTAACCTGTGCTCTGGCCCCGTCTCCCTTTTGTTGTTTTTCTTTTTAATAAAATCTCCTTTCTTTCATGCCTGCCCGCCCTTGTTTCTGCGACTTTGTCCCCATCAGGGAGAGCCCAATACAGAGCGACTTTATCTC