Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Sart1
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP
Also known as -
Coordinate chr1:220762496-220771158
Strand -
Gene summary Predicted to be involved in mRNA cis splicing, via spliceosome; maturation of 5S rRNA; and positive regulation of cytotoxic T cell differentiation. Predicted to be located in Cajal body; Golgi apparatus; and nuclear speck. Predicted to be part of U2-type precatalytic spliceosome; U4/U6 x U5 tri-snRNP complex; and catalytic step 2 spliceosome. Orthologous to human SART1 (spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Sart1

Retroname Coord Strand Genomic Region ENSG
Sart1P1 chr8:21975463-21977144 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_031596.1
CCCATTTTGCGTCGTCTGGGTTCGGGTGGCGGCCCGGCTCCAGGCGGACGCACTAATCATGGGGTCGTCAAAGAAGCACCGTGGAGAGAAGGAGGCAGCCGGGACTACGGCTGCGGCCGGTACCGGGGGCACTACCGagcagccgccacggcatcgagagcacaagaaacacaagcatcggagcagcggcggcggcagcagcggcggcgaacgacggaagcggagccgcgagcgtggggccgagcgcgggagcgggaggcgcggggccgaagccgaggcccgcagcggcgCGCATGGTCGTGAACGAAGCCAAGCGGAACCCTCGGAGCGGCGCGTGAAGCGGGAGAAACGCGATGAAGGCTATGAGGCCGCTGCCAGCTCCAAAGCCAGCTCTGGAGATGCCTCATCACTCAGCATCGAGGAGACCAATAAACTCCGAGCAAAGTTGGGGTTGAAGCCCTTGGAAGTCAATGCTGTTAAGAAAGAGGCGGGCACCAAGGAGGAGCCCGTGGCAGCCGATGTTATCAACCCCATGGCCTTGCGACAGCGTGAAGAACTACGGGAGAAGCTGGCAGCTGCCAAGGAAAAGCGCTTGCTGAACCAAAAATTGGGGAAAATAAAGACACTGGGGGAGGATGACCCCTGGCTTGATGACACTGCAGCCTGGATAGAGAGGAGCCGGCAGCTACAGAAAGAGAAGGACTTGGCGGAGAAGCGGGCCAAGCTGCTAGAAGAGATGGACCAAGAGTTTGGTGTGAGCACTTTAGTGGAGGAGGAGTTTGAGCAGAGGCGACAGGACCTGTACAGCGCCCGGGACTTGCAAGGCCTCACCGTGGAACATGCAATCGATTCCTTTCGAGAAGGGGAGACTGTGGTCCTCACTCTCAAGGACAAAGGGGTTCTGCAGGAGGGGGAGGATGTGCTGGTGAATGTGAACATGGTGGACAAGGAGCGAGCAGACAAGAACGTGGAACTTCGGAAGAAGAAGCCTGACTACCTGCCCTATGCGGAGGATGAGAGTGTGGATGACTTGGCACAGCAAAAACCTCGCTCTATCCTGGCCAAATATGATGAGGAACTGGAGGGCGAGCGGCCACATTCCTTCCGTTTAGAGCAGGGTGGCATGGCCGATGGCCTGAGAGAACGAGAGCTCGAAGAAATCCGGACCAAGCTACGGCTGCAGGCTCAGTCTCTGAACACTGTAGGGCCCCGGCTTGCCTCTGAGTACCTCAGTCCGGAGGAGATGGTGACTTTCAAAAAGACCAAACGGAGAGTGAAGAAAATCCGAAAGAAGGAGAAGGAGGTAATAATGCGGGCAGATGACTTGCTGCCCCTTGGCGAAGACCAGACTCAGGACGGGGACTTTGGATCCAGGCTTCGGGGCCGGGGTCGGCGCCGAGTTCCTGAAGTGGAGGAGGAGGCCCTTGAGGATGAAGAGAAGGACCCTGTGGCCCAGCCGCCACCATCAGATGACACTCGCGTAGAGAACATGGACATCAGTGATGAGGAGGATGGGGGGGCTCTTCCCTCGGGGCCCCCAgagctggaggaggacgaagcggagctggagctgcagaagcagctggagaaggggcgccggctgcggcagctgcagcaactgcagcagctgcGGGACAGCGGTGAGAAGGTGCTGGAGATTGTGAAGAAACTGGAGTCTCGCCAACGTGGCTGGGAAGAGGAAGAGGATCCTGAGCGGAAGGGGACCATCGTGTTCAATGCCACTTCTGAGTTCTGTCGCACTCTGGGGGAAATCCCCACTTACGGATTAGCTGGCAACCGAGAGGAGCAGGAGGAGCTCATGGACTTTGAAAGGGATGAAGAGCGCTCGGCCAATGGTGGCTCTGAATCAGATGGCGAAGAGAACATTGGCTGGAGCACCGTCAACCTGGATGAGGAGAAGCAACATCAGGATTTCTCCGCTTCCTCTACCACCATCCTGGATGAAGAGCCCATTGTGAACAGAGGGCTGGCGGCTGCCCTGCTCCTGTGTCAGAACAAAGGACTGTTGGAGACCACGGTACAAAAGGTGGCCCGGGTAAAGGCTCCCAATAAGTCACTGCCTTCAGCAGTGTACTGCATCGAGGATAAGATGGCCATTGATGACAAGTACAGCCGACGTGAGGAGTACAGGGGCTTCACCCAGGACTTCAAGGAGAAGGATGGCTACAAGCCCGATGTTAAGATTGAATATGTGGATGAGACGGGCAGGAAACTGACTCCCAAGGAGGCATTCCGGCAGCTGTCCCACCGCTTCCATGGGAAGGGCTCAGGGAAGATGAAGACTGAGCGGCGGATGAAGAAGCTGGATGAGGAGGCGCTCCTAAAGAAAATGAGTTCCAGTGACACGCCCCTGGGAACCGTGGCACTGCTCCAGGAGAAGCAGAAGGCCCAAAAGACACCGTACATCGTGCTCAGTGGCAGTGGCAAGAGCATGAATGCGAACACCATCACCAAATGAAGCACCTCCCTGTCCCAGATGTAATGTTAAATAAAGTTCCCGCCTTATTTTT