Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Lsm8
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name LSM8 homolog, U6 small nuclear RNA associated
Also known as -
Coordinate chr4:45555077-45560943
Strand +
Gene summary Predicted to enable RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in nucleus. Predicted to be part of Lsm2-8 complex; U2-type precatalytic spliceosome; and spliceosomal snRNP complex. Orthologous to human LSM8 (LSM8 homolog, U6 small nuclear RNA associated). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Lsm8

Retroname Coord Strand Genomic Region ENSG
Lsm8P1 chr6:101921125-101921848 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001106585.1
GATTCGTCACCGCTGAGGCCTCAGAGTCTCGCGATATTTGCGTTCGCCAGCGGGCGCGAATCTGTACGTGTTTCTAGCGGGCGGTGTTTTGTCTCCTTGTTGCTGATTCCTCTCAGATTCCCGGAACCTCCGGGCCCAGCAGCATGACGTCTGCCTTGGAGAACTACATCAACCGAACTGTTGCAGTAATAACTTCTGATGGCAGAATGATCGTGGGAACCCTGAAAGGTTTTGACCAGACCATTAACTTGATTCTGGATGAAAGCCACGAGCGGGTGTTCAGCTCTTCTCAGGGAGTAGAACAAGTGGTATTGGGGTTATACATTGTGAGAGGAGATAATGTAGCAGTCATTGGGGAAATAGATGAAGAGACAGATTCTGCACTCGACTTGGGGAACATCCGAGCAGAACCTCTGAACTCCGTAGCACACTGAGAGCTTAGTGTGCAGGAGACGTCTGTAAATCCTGTACAGAGACTTCTTATGCTCAGAGTGATGTCTAGATTTTTTTATGAGTGTGTAATTGTGGATATTTGACTTCATGTTGGTACACTGTAATATGTAATTTAAATATTTCTACCTTTTTATCGGGAAACATTGCCTAAATTAATGTGGTTGCTTGGTTTATTTTTCTATCAAATGAAACAAAAATGTAAGGGACATTTTGGAAAGTTACAAAGTACCACTCTTTTTGGTAATGTAATATTTATAGGAAATTGGCTGTAAAGAGAACTTAGACTGTTATTGTAACTTAGACATGCAACTAACAGTAATAAAAGACACGTTTCTTTTTGTGGC