Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name GTF3A
Plot displaying the genomic locations of a parental gene (in chr13) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name general transcription factor IIIA
Also known as AP2|TFIIIA
Coordinate chr13:27424619-27435823
Strand +
Gene summary The product of this gene is a zinc finger protein with nine Cis[2]-His[2] zinc finger domains. It functions as an RNA polymerase III transcription factor to induce transcription of the 5S rRNA genes. The protein binds to a 50 bp internal promoter in the 5S genes called the internal control region (ICR), and nucleates formation of a stable preinitiation complex. This complex recruits the TFIIIC and TFIIIB transcription factors and RNA polymerase III to form the complete transcription complex. The protein is thought to be translated using a non-AUG translation initiation site in mammals based on sequence analysis, protein homology, and the size of the purified protein. [provided by RefSeq, Jul 2008]

Retrocopy(s) from GTF3A

Retroname Coord Strand Genomic Region ENSG
GTF3AP7 chr2:223920650-223920808 + Intragenic
N/A UCSC
GTF3AP6 chr7:118880447-118881067 - Intergenic
ENSG00000229982 UCSC
GTF3AP5 chr7:14985333-14985523 - Intergenic
ENSG00000225816 UCSC
GTF3AP1 chr9:6196097-6196776 + Intergenic
ENSG00000237274 UCSC

Expression

Transcript Sequences

>NM_002097.3
AAGTGTGCCGGCGTCGCGCGAAGGTTCAGCAGGGAGCCGTGGGCCGGGCGCGCCGGTTCCCGGCACGTGTCTCGGCACGTGGCAGCGCGCCTGGCCCTGGGCTTGGAGGCGCCGGCGCCCTGGATCCGCCGGCCGTGGTCGCCGAGTCGGTGTCGTCCTTGACCATCGCCGACGCGTTCATTGCAGCCGGCGAGAGCTCAGCTCCGACCCCGCCGCGCCCCGCGCTTCCCAGGAGGTTCATCTGCTCCTTCCCTGACTGCAGCGCCAATTACAGCAAAGCCTGGAAGCTTGACGCGCACCTGTGCAAGCACACGGGGGAGAGACCATTTGTTTGTGACTATGAAGGGTGTGGCAAGGCCTTCATCAGGGACTACCATCTGAGCCGCCACATTCTGACTCACACAGGAGAAAAGCCGTTTGTTTGTGCAGCCAATGGCTGTGATCAAAAATTCAACACAAAATCAAACTTGAAGAAACATTTTGAACGCAAACATGAAAATCAACAAAAACAATATATATGCAGTTTTGAAGACTGTAAGAAGACCTTTAAGAAACATCAGCAGCTGAAAATCCATCAGTGCCAGCATACCAATGAACCTCTATTCAAGTGTACCCAGGAAGGATGTGGGAAACACTTTGCATCACCCAGCAAGCTGAAACGACATGCCAAGGCCCACGAGGGCTATGTATGTCAAAAAGGATGTTCCTTTGTGGCAAAAACATGGACGGAACTTCTGAAACATGTGAGAGAAACCCATAAAGAGGAAATACTATGTGAAGTATGCCGGAAAACATTTAAACGCAAAGATTACCTTAAGCAACACATGAAAACTCATGCCCCAGAAAGGGATGTATGTCGCTGTCCAAGAGAAGGCTGTGGAAGAACCTATACAACTGTGTTTAATCTCCAAAGCCATATCCTCTCCTTCCATGAGGAAAGCCGCCCTTTTGTGTGTGAACATGCTGGCTGTGGCAAAACATTTGCAATGAAACAAAGTCTCACTAGGCATGCTGTTGTACATGATCCTGACAAGAAGAAAATGAAGCTCAAAGTCAAAAAATCTCGTGAAAAACGGAGTTTGGCCTCTCATCTCAGTGGATATATCCCTCCCAAAAGGAAACAAGGGCAAGGCTTATCTTTGTGTCAAAACGGAGAGTCACCCAACTGTGTGGAAGACAAGATGCTCTCGACAGTTGCAGTACTTACCCTTGGCTAAGAACTGCACTGCTTTGTTTAAAGGACTGCAGACCAAGGAGCGAGCTTTCTCTCAGAGCATGCTTTTCTTTATTAAAATTACTGATGCAGAACATTTGATTCCTTATCATTTCCATGGTCTTTGTTCAAAGTGTCTCTTTCCTGGGTCTCTTGAGTTTCTTTATATGCCTTCTCCTCATTTTTGCTGAAAGCACGAAGAACACACATTAAAGCTTTTCCTCCTTGAA