Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Ppp3r1
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name protein phosphatase 3, regulatory subunit B, alpha
Also known as -
Coordinate chr14:100311224-100360879
Strand +
Gene summary Enables phosphoprotein phosphatase activity. Involved in protein dephosphorylation. Predicted to be located in Schaffer collateral - CA1 synapse; parallel fiber to Purkinje cell synapse; and sarcolemma. Predicted to be part of calcineurin complex. Predicted to be active in glutamatergic synapse. Human ortholog(s) of this gene implicated in Alzheimer's disease and dilated cardiomyopathy. Orthologous to human PPP3R1 (protein phosphatase 3 regulatory subunit B, alpha). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ppp3r1

Retroname Coord Strand Genomic Region ENSG
Ppp3r1P1 chr3:145263040-145264051 + Intergenic
 N/A UCSC
Ppp3r1P2 chr3:146105975-146108542 - Intergenic
 N/A UCSC
Ppp3r1P3 chr8:20619704-20622491 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_017309.2
GTCAGCGCGAGCCGCTGCAGCGATTCGGGGCCGCCCGTGAGCGTGAGGCTGCAACCCTCTCCTCCCGCCGACGCATCTCCAACCGAGACTCCGCCCGCCTCACTCCGGGCCCAGGCCCCGTTGCACCCCGCCCGGCACCGGACAGCAAAGCCGCCGTCGCCGCGTCCCAAGGAACCTACAGCCGCCGCCAGCGCCGCCCGCCTAGCAAGATGGGAAATGAGGCGAGTTACCCTTTGGAAATGTGCTCACACTTCGATGCTGATGAGATTAAAAGGCTAGGAAAGAGATTCAAGAAGCTTGACTTGGACAACTCTGGTTCTTTGAGCGTGGAGGAGTTCATGTCTCTGCCTGAGTTACAACAGAACCCTTTAGTACAGCGGGTCATAGATATATTCGACACAGACGGGAATGGAGAAGTGGACTTCAAAGAATTCATTGAAGGAGTCTCTCAGTTCAGTGTCAAAGGCGATAAGGAACAGAAGTTGAGGTTCGCTTTCCGTATCTACGACATGGATAAAGACGGCTATATTTCCAATGGAGAGCTCTTCCAGGTGTTGAAGATGATGGTGGGCAACAACCTGAAAGATACGCAGTTACAGCAGATTGTAGACAAAACCATAATAAACGCAGATAAGGACGGGGACGGGAGAATATCCTTTGAGGAGTTCTGTGCTGTTGTAGGTGGCCTAGATATCCACAAAAAGATGGTGGTGGATGTGTGACTCTTTGAAGACTCTACCACCCAGCACTTTTGCTTTCTTCTCCATCTCTGAAGATCTGCTCAAGACGTCCAGCAATGCTCTCTGTGTGTGTAAATGGAAGTATTTTTCTCTGTGAAGCCACATTTTCCAACATGAGCCTCATGAAGCCAACGAAGTGTTATTGAACTCCTACCCTCTCAATAACTCAGTGTAGCACTTTCAAGTTTGAGGGGCAGCAGCAGGAAAAGAGCATATCAGTATGGTGGAGAAAGGGAAGGGGTGGCTCTTTAATTTATTTTTCTTCATCTTTTATAACAAGAAAGtatctatatatacatatgtaaatatttatatatagatatatgtagctttctatatatttaGTAGGTTGGCTTTAATTTAATATACTTGATTCAGAAACAAAATGTTAGAGTACAAAAGTGCCAAGCAGAACATATACCATCCTTACTTTTATTTCACACGGTTTTATATGTAGATAGAGGATTGTACAATTCGCGCCAGGTATTAGGCCAGCTAGTTTCCTTTCTCTGTGCTTTCTCCTTTGAGAGATTGACAAAGCATTTGTTAATGCCCTATTATTTACCTTAATTACACTTTTGTAACGAGTCTGTAACTTTATTTATATCTCTGAGTATCTTTCCAGGGACTGTGTCTTACTGCCGAGCAGCGTTTAATCCATCTCTGTTGGAGGTCTAGTTCAGTGCTGTTGCCAAGAGTGGGTTCTTGTGTCCATAGAACTGCATACCCTGTGGCTGCTTCAGGCTGATACTTTTTAAGTAGTCGCTGTTAATTTTATTAAGCGTCCCTGAGAAAAAATGTAATTAGCAGTTGTGATTTTATCAAGGTCAGAAGTTTTCTGAGGCAGTCATGACTTTTTTAAACGTTATTATTTAGTGAAGAAAATCCAAAGCAGTCATGCAATGGCTTAAAACATCCTTGTTTCGTTGTACACAAGGAAACACTTGTCACTAAACTACAAATCCTGGGTTTATTCATGCATTTCAAAAAAAGTTAACCGGAAAAAAAGTCAACTGATACTTAAAGAGCACATATTTCTGTAAAATCCCATTTGTGGTTAAAATGGGGGAGTATCCTGCTAATCTATATGCCGTTGGAGAGCAGATTTTGCCCACATTTACATTTTTAAAATTTCTTTGCCAGATAGAAGGCAAGATAGCACATGATGGATTTTGTTGTTTTGCCTGCACAACTAGCAATGGCTGATGATGTAATAGATTTGTGTGACGTAAAAGTACGTCATGGTCTACCACATGACGTTATCCCTTCCCTTCTCTGCAAAGGTACTGGAAGAGAGACATTCTGGATAGTTTTATATGGCAGTCTTCCCTATACAGTTTTTCTATATAAATTGGTTTTGTAATCATGAGTGGTAAAGGGCGGGTCGAATCGAGGTGAGGGAATATTAAATAGAGTACACCTGCCTGCCACCGCTGTCCCCTCAACTGAGTGCTGCACACCATGGGCTCTGTCTGTGAGAGAAAAATCCCGGTGCTTGGTGTCTTTGCATGACATGGAGTTTTGCATGTAGATCAATTTAAAATGTACCTCTTGTTTACATAATTTGCATAATTTTAAAAGATGATGTTGCCAAACTTTGGAAATGTTAATACTCAAAATGAAAATCTCCACTCCATGTAACTACTTTCTCCCTCTGGATCAGCACATGGCTTGCAATCCCAGCCAGTGGTGTGATCTGTCCCAGTGTCAACCGCCATGTGCTCTGCTTCAGGAGGGACTGACTAGTCTTTTGTGAATTTTTTTGTACATAATTATTTGTTACAAATATTTTAGCAAATGCTTTCTATATCTCTTGCTTGTGCATATCTTGGCTGGCGTTGTGGAAAAAAATAGTGCAAACTATTTCCTTACTGGGGAATGAAGGGGTTTCTTTTTTAGTTTGTGTGAGGGAGGTGGGGAGGGCATGGTTTATGTTGAATGTTTAAATTTTCTTCTGCATGATACATGTCATGTTGTGAAATCTTTAGAGAACTTCATACTGTATGAGTAAGAAAATAAAATATTTGAAACTTG