Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Fau
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name FAU ubiquitin like and ribosomal protein S30 fusion
Also known as -
Coordinate chr1:221420312-221421827
Strand +
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in antimicrobial humoral immune response mediated by antimicrobial peptide and defense response to other organism. Predicted to be located in cytosolic ribosome and extracellular space. Predicted to be part of cytosolic small ribosomal subunit. Orthologous to human FAU (FAU ubiquitin like and ribosomal protein S30 fusion). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Fau

Retroname Coord Strand Genomic Region ENSG
FauP1 chr1:164807362-164807865 + Intragenic
N/A UCSC
FauP3 chr1:188200359-188200867 + Intragenic
N/A UCSC
FauP5 chr3:57123016-57123428 + Intragenic
N/A UCSC
FauP7 chr6:86131205-86131689 + Intergenic
N/A UCSC
FauP8 chr6:86921684-86922168 + Intergenic
N/A UCSC
FauP9 chr10:66509048-66509545 + Intergenic
N/A UCSC
FauP11 chr16:81538414-81538922 + Intergenic
N/A UCSC
FauP2 chr1:183913803-183914276 - Intragenic
N/A UCSC
FauP4 chr3:135863104-135863246 + Intragenic
N/A UCSC
FauP6 chr5:138649503-138649916 - Intragenic
N/A UCSC
FauP13 chrX:108524117-108524504 + Intragenic
N/A UCSC
FauP10 chr15:34265193-34265420 - Intergenic
N/A UCSC
FauP12 chr16:90244851-90245730 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001012739.1
CGCTCCTTCCTCTTTCTTGACTCCATCTTCGCGGTTGCAGCAGCGGCGTCCGCGGGTAAGTAGCCAACATGCAGCTCTTTGTCCGCGCCCAGGAACTACACACCCTCGAGGTGACCGGCCAGGAGACGGTCGCCCAGATCAAAGCTCATGTGGCCTCACTGGAAGGCATTGCCCCCGAAGATCAAGTCGTGCTTCTGGCAGGCTCGCCGCTGGAGGATGAGGCCACCCTAGGCCAGTGTGGTGTAGAGGCCCTGACCACTCTGGAGGTAGCTGGCCGCATGCTGGGAGGTAAAGTTCATGGTTCTCTGGCTCGTGCTGGGAAAGTGAGAGGTCAGACTCCCAAGGTGGCCAAACAGgaaaagaagaagaagaagaCTGGTCGGGCCAAGAGGCGAATGCAGTACAACCGACGCTTTGTCAATGTTGTGCCCACCTTTGGCAAGAAGAAGGGCCCCAATGCTAATTCCTAAGTCCTGTTGTGATCCTGCCACACTAATAAAGCCACTTTGCCCAGAA
>NM_001160231.1
CGCTCCTTCCTCTTTCTTGACTCCATCTTCGCGGTTGCAGCAGCGGCGTCCGCGGTAGCCAACATGCAGCTCTTTGTCCGCGCCCAGGAACTACACACCCTCGAGGTGACCGGCCAGGAGACGGTCGCCCAGATCAAAGCTCATGTGGCCTCACTGGAAGGCATTGCCCCCGAAGATCAAGTCGTGCTTCTGGCAGGCTCGCCGCTGGAGGATGAGGCCACCCTAGGCCAGTGTGGTGTAGAGGCCCTGACCACTCTGGAGGTAGCTGGCCGCATGCTGGGAGGTAAAGTTCATGGTTCTCTGGCTCGTGCTGGGAAAGTGAGAGGTCAGACTCCCAAGGTGGCCAAACAGgaaaagaagaagaagaagaCTGGTCGGGCCAAGAGGCGAATGCAGTACAACCGACGCTTTGTCAATGTTGTGCCCACCTTTGGCAAGAAGAAGGGCCCCAATGCTAATTCCTAAGTCCTGTTGTGATCCTGCCACACTAATAAAGCCACTTTGCCCAGAA
>NM_001160232.1
CGCTCCTTCCTCTTTCTTGACTCCATCTTCGCGGTTGCAGCAGCGGCGTCCGCGGGTAAGCCAACATGCAGCTCTTTGTCCGCGCCCAGGAACTACACACCCTCGAGGTGACCGGCCAGGAGACGGTCGCCCAGATCAAAGCTCATGTGGCCTCACTGGAAGGCATTGCCCCCGAAGATCAAGTCGTGCTTCTGGCAGGCTCGCCGCTGGAGGATGAGGCCACCCTAGGCCAGTGTGGTGTAGAGGCCCTGACCACTCTGGAGGTAGCTGGCCGCATGCTGGGAGGTAAAGTTCATGGTTCTCTGGCTCGTGCTGGGAAAGTGAGAGGTCAGACTCCCAAGGTGGCCAAACAGgaaaagaagaagaagaagaCTGGTCGGGCCAAGAGGCGAATGCAGTACAACCGACGCTTTGTCAATGTTGTGCCCACCTTTGGCAAGAAGAAGGGCCCCAATGCTAATTCCTAAGTCCTGTTGTGATCCTGCCACACTAATAAAGCCACTTTGCCCAGAA