Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Atp5mc1
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ATP synthase membrane subunit c locus 1
Also known as Atp5g1
Coordinate chr10:83895941-83898640
Strand -
Gene summary Enables ligand-gated channel activity. Involved in several processes, including cold acclimation; negative regulation of mitochondrial membrane potential; and response to amino acid. Located in distal axon and neuronal cell body. Part of cation channel complex and mitochondrial proton-transporting ATP synthase complex, coupling factor F(o). Orthologous to human ATP5MC1 (ATP synthase membrane subunit c locus 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atp5mc1

Retroname Coord Strand Genomic Region ENSG
Atp5g1P2 chr2:231827765-231828027 + Intergenic
N/A UCSC
Atp5g1P3 chr3:105554257-105554438 + Intergenic
N/A UCSC
Atp5g1P6 chr3:175382504-175382977 + Intergenic
N/A UCSC
Atp5g1P8 chr3:82839995-82840441 - Intergenic
N/A UCSC
Atp5g1P10 chr5:145211443-145211919 + Intergenic
N/A UCSC
Atp5g1P14 chr13:53371593-53371854 + Intragenic
N/A UCSC
Atp5g1P1 chr1:222142410-222142937 + Intergenic
N/A UCSC
Atp5g1P4 chr3:114149252-114149495 + Intergenic
N/A UCSC
Atp5g1P5 chr3:165774303-165774460 - Intergenic
N/A UCSC
Atp5g1P7 chr3:80866243-80866624 - Intragenic
N/A UCSC
Atp5g1P9 chr5:101619650-101620039 - Intergenic
N/A UCSC
Atp5g1P11 chr6:69950468-69950968 + Intergenic
N/A UCSC
Atp5g1P13 chr12:48560458-48560984 + Intergenic
N/A UCSC
Atp5g1P15 chr18:30230569-30231092 + Intergenic
N/A UCSC
Atp5g1P12 chr8:33396729-33397126 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_017311.1
GTGTGCTGTGGGCCGAGCAGGGGCTGCAGGGGAGTGGGAGTGCAGATTGAAAAATGCAGACCACCAAGGCACTGCTCATTTCTCCAGTTCTGATCCGCTCCTGTACCAGGGGTCTAATCAGGCCTGTGTCTGCCTCCCTCCTGAGTAGACCAGAGGCTCCATCTAAAAAGCCTTCCTGCTGCAGCTCCCCTCTCCAGGTGGCCAGACGGGAATTCCAGACCAGTGTTATTTCCCGGGACATTGACACAGCAGCCAAGTTTATTGGTGCTGGGGCCGCCACAGTTGGTGTGGCTGGATCAGGGGCTGGCATTGGCACAGTGTTTGGTAGCTTGATTATTGGCTATGCCAGGAACCCGTCTCTCAAGCAGCAGCTCTTCTCCTATGCCATCCTGGGCTTTGCCCTGTCTGAGGCCATGGGGCTCTTCTGTTTGATGGTCGCCTTCCTCATCCTCTTCGCCATGTGAGGCTCCATGGGGTCACCCGGCCGTCCCTGCTGCTTTGACTCCATGCCAGTCCTGGTGCTGGAGTGTGCTGAGCTTTACCATTAAACTACGTTTCTCT
>XM_006247188.3
TGAGGAGATAACGGCCAATGGGAGTGGAGGGACCCCGAACACGTGGGTGGGGGAGCTGAGCGCTGAGACCAAGGGCTAAAGCTGCGAGATTGAAAAATGCAGACCACCAAGGCACTGCTCATTTCTCCAGTTCTGATCCGCTCCTGTACCAGGGGTCTAATCAGGCCTGTGTCTGCCTCCCTCCTGAGTAGACCAGAGGCTCCATCTAAAAAGCCTTCCTGCTGCAGCTCCCCTCTCCAGGTGGCCAGACGGGAATTCCAGACCAGTGTTATTTCCCGGGACATTGACACAGCAGCCAAGTTTATTGGTGCTGGGGCCGCCACAGTTGGTGTGGCTGGATCAGGGGCTGGCATTGGCACAGTGTTTGGTAGCTTGATTATTGGCTATGCCAGGAACCCGTCTCTCAAGCAGCAGCTCTTCTCCTATGCCATCCTGGGCTTTGCCCTGTCTGAGGCCATGGGGCTCTTCTGTTTGATGGTCGCCTTCCTCATCCTCTTCGCCATGTGAGGCTCCATGGGGTCACCCGGCCGTCCCTGCTGCTTTGACTCCATGCCAGTCCTGGTGCTGGAGTGTGCTGAGCTTTACCATTAAACTACGTTTCTCTAAAC
>XM_006247189.1
CAGTCACCTTGAGCAGGGAGTGTGCTGTGGGCCGAGCAGGGGCTGCAGGGGAGTGGGAGTGCAGGTGACTTGGGGCCCGGAGACAGGGTCCGCTAGGCCGTGGGCTGTGCCATGTGGAGCAGCATTTGCCTCCAGGGATAGGGAAGGAGGACTAAAGTCTTTAAGCCTTATCAATTAATGTTAATTACCAACGATTGAAAAATGCAGACCACCAAGGCACTGCTCATTTCTCCAGTTCTGATCCGCTCCTGTACCAGGGGTCTAATCAGGCCTGTGTCTGCCTCCCTCCTGAGTAGACCAGAGGCTCCATCTAAAAAGCCTTCCTGCTGCAGCTCCCCTCTCCAGGTGGCCAGACGGGAATTCCAGACCAGTGTTATTTCCCGGGACATTGACACAGCAGCCAAGTTTATTGGTGCTGGGGCCGCCACAGTTGGTGTGGCTGGATCAGGGGCTGGCATTGGCACAGTGTTTGGTAGCTTGATTATTGGCTATGCCAGGAACCCGTCTCTCAAGCAGCAGCTCTTCTCCTATGCCATCCTGGGCTTTGCCCTGTCTGAGGCCATGGGGCTCTTCTGTTTGATGGTCGCCTTCCTCATCCTCTTCGCCATGTGAGGCTCCATGGGGTCACCCGGCCGTCCCTGCTGCTTTGACTCCATGCCAGTCCTGGTGCTGGAGTGTGCTGAGCTTTACCATTAAACTACGTTTCTCTAAACCA