Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Dppa3
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name developmental pluripotency-associated 3
Also known as -
Coordinate chr4:155437675-155441059
Strand +
Gene summary Predicted to enable methylated histone binding activity. Predicted to be involved in negative regulation of DNA demethylation; protection of DNA demethylation of female pronucleus; and regulation of genetic imprinting. Predicted to act upstream of or within embryonic cleavage. Predicted to be located in cytoplasm; female pronucleus; and male pronucleus. Predicted to be active in nucleus. Orthologous to human DPPA3 (developmental pluripotency associated 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Dppa3

Retroname Coord Strand Genomic Region ENSG
Dppa3P1 chr1:198083956-198084662 - Intragenic
N/A UCSC
Dppa3P2 chr1:225064144-225064386 + Intergenic
N/A UCSC
Dppa3P3 chr2:227842053-227842210 - Intragenic
N/A UCSC
Dppa3P4 chr3:111298712-111299420 + Intergenic
N/A UCSC
Dppa3P5 chr4:150199608-150200318 + Intergenic
N/A UCSC
Dppa3P6 chr4:2657727-2658361 + Intergenic
N/A UCSC
Dppa3P7 chr5:62693806-62694498 + Intergenic
N/A UCSC
Dppa3P8 chr5:90796768-90797476 - Intergenic
N/A UCSC
Dppa3P9 chr7:53936218-53936744 + Intragenic
N/A UCSC
Dppa3P10 chr7:98734481-98735192 - Intergenic
N/A UCSC
Dppa3P11 chr8:60683113-60683434 - Intergenic
N/A UCSC
Dppa3P12 chr9:104133876-104134322 - Intergenic
N/A UCSC
Dppa3P13 chr9:53735062-53735224 - Intergenic
N/A UCSC
Dppa3P14 chr9:61204465-61204921 + Intergenic
N/A UCSC
Dppa3P15 chr14:74094427-74095146 - Intergenic
N/A UCSC
Dppa3P16 chr15:16926422-16926885 - Intergenic
N/A UCSC
Dppa3P17 chr15:32412004-32412709 - Intergenic
N/A UCSC
Dppa3P18 chr17:2920609-2921313 + Intergenic
N/A UCSC
Dppa3P19 chrX:25915086-25915476 - Intergenic
N/A UCSC
Dppa3P20 chrX:94572920-94573340 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001047864.1
ATGGACGAGCCATCCGAGAAAGTCGACCCAGTCGTGAACCCAGAAACTCAGATGTATGATGGATCTCAGAGGGAAGATGAAGGGGACTCACCGGATGATTCAGAAATCCTACAACCAGAAACACTAGTAAAGGTCATGAAAAAGCTAACCCTGAACCCCAGTGCCAAGCCGACAAAATATCATCGTCGTCAAAGGGTTCGTCTCCAGGTTAAGAGCCAGCCTGTGGAGAACAGAAGTGAAAGAATCATGAGGGAAGTTCAAAGCGCCTTTCCCAGGAGAAGGGTCCGCACTCTGTTGTCCGTGCTGAAAGACCCCATAGCAAGGATGAGAAGATTTGTTCGGATTGAGCAGAGACAAAGACAGCTTGAAGGAAATGAGAGACGAGATGAGCCATTCAGATGTCTCTGCACTTTCTGCCATTATCAGAGATGGGATCCTTCTGAGAATGCTAAAATCGGGCAGAACCAGAAGAATTAGGGCAGTTTGAATTGTACACCGTCCTTGCCGTTAACGGTGCCATGCAGCAGATGTGAAAGCTGTTTTTTTGTTTAAGATTAAACTTTTCTTGGTGCTGGGGAAATCTCTTCTAATTGCTAACCTTTAAATTATATAGGATGTGTGACATTTGGATTCATGGGAATGACAGATTTACCCAAGAATTGAGCATGAGTCAAAGCCTGGTAGTTTGATTTAGAAGGTAATTGGAAT