Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl7
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein L7
Also known as -
Coordinate chr5:2633517-2636525
Strand +
Gene summary Enables 5S rRNA binding activity. Involved in liver regeneration. Located in A band and ribosome. Part of cytosolic large ribosomal subunit. Orthologous to human RPL7 (ribosomal protein L7). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl7

Retroname Coord Strand Genomic Region ENSG
Rpl7P1 chr1:145104876-145105621 - Intergenic
N/A UCSC
Rpl7P2 chr1:193348416-193348930 + Intragenic
N/A UCSC
Rpl7P3 chr1:222957284-222958126 + Intergenic
N/A UCSC
Rpl7P4 chr1:79630303-79630971 + Intergenic
N/A UCSC
Rpl7P5 chr2:123428031-123428768 - Intragenic
N/A UCSC
Rpl7P6 chr2:14116910-14117748 - Intergenic
N/A UCSC
Rpl7P7 chr2:178212090-178212835 - Intragenic
N/A UCSC
Rpl7P8 chr2:228698240-228698983 + Intergenic
N/A UCSC
Rpl7P9 chr2:229269360-229270142 + Intragenic
N/A UCSC
Rpl7P10 chr2:240994287-240995052 + Intergenic
N/A UCSC
Rpl7P11 chr2:69946701-69946944 + Intergenic
N/A UCSC
Rpl7P12 chr3:100040243-100041009 - Intergenic
N/A UCSC
Rpl7P13 chr3:115201384-115202153 - Intergenic
N/A UCSC
Rpl7P14 chr3:149727289-149728050 - Intergenic
N/A UCSC
Rpl7P15 chr3:173645018-173645863 + Intergenic
N/A UCSC
Rpl7P16 chr3:62798194-62798645 + Intergenic
N/A UCSC
Rpl7P17 chr4:148421559-148422240 - Intragenic
N/A UCSC
Rpl7P18 chr4:155936741-155937506 - Intergenic
N/A UCSC
Rpl7P19 chr4:16986325-16986585 + Intragenic
N/A UCSC
Rpl7P20 chr4:177968159-177968875 + Intergenic
N/A UCSC
Rpl7P21 chr4:27528575-27529207 - Intragenic
N/A UCSC
Rpl7P22 chr4:2814720-2815387 - Intergenic
N/A UCSC
Rpl7P23 chr5:111268686-111269301 - Intergenic
N/A UCSC
Rpl7P24 chr5:85178284-85178986 + Intergenic
N/A UCSC
Rpl7P25 chr6:18768530-18769369 - Intergenic
N/A UCSC
Rpl7P26 chr6:76897363-76898122 + Intergenic
N/A UCSC
Rpl7P27 chr7:94789057-94789824 - Intergenic
N/A UCSC
Rpl7P28 chr8:132026411-132026992 - Intergenic
N/A UCSC
Rpl7P29 chr8:3689797-3690610 + Intergenic
N/A UCSC
Rpl7P30 chr8:70229924-70230685 + Intergenic
N/A UCSC
Rpl7P31 chr8:93465073-93465810 - Intergenic
N/A UCSC
Rpl7P32 chr9:8060599-8061443 - Intragenic
N/A UCSC
Rpl7P33 chr9:81055655-81055976 - Intergenic
N/A UCSC
Rpl7P34 chr10:6656864-6657645 + Intergenic
N/A UCSC
Rpl7P35 chr11:15178180-15178932 + Intergenic
N/A UCSC
Rpl7P36 chr12:33250304-33251099 - Intergenic
N/A UCSC
Rpl7P37 chr12:39285071-39285802 - Intragenic
N/A UCSC
Rpl7P38 chr13:34355910-34356529 + Intergenic
N/A UCSC
Rpl7P39 chr13:68630700-68631278 + Intergenic
N/A UCSC
Rpl7P40 chr13:74363419-74364165 + Intergenic
N/A UCSC
Rpl7P41 chr13:87206288-87207012 - Intergenic
N/A UCSC
Rpl7P42 chr14:52478382-52479159 + Intergenic
N/A UCSC
Rpl7P43 chr14:62147476-62148298 + Intragenic
N/A UCSC
Rpl7P44 chr14:83608378-83609199 + Intragenic
N/A UCSC
Rpl7P45 chr15:20013012-20013282 + Intragenic
N/A UCSC
Rpl7P46 chr15:39577296-39578145 - Intragenic
Intragenic
N/A UCSC
Rpl7P47 chr16:11945429-11946374 + Intergenic
N/A UCSC
Rpl7P48 chr16:36450176-36451018 - Intergenic
N/A UCSC
Rpl7P49 chr16:5218824-5219665 + Intragenic
N/A UCSC
Rpl7P50 chr16:53639414-53640139 - Intergenic
N/A UCSC
Rpl7P51 chr17:49650425-49651202 - Intergenic
N/A UCSC
Rpl7P52 chr18:22314593-22314916 - Intergenic
N/A UCSC
Rpl7P53 chr18:25479852-25480609 - Intergenic
N/A UCSC
Rpl7P54 chr18:36723671-36724172 - Intergenic
N/A UCSC
Rpl7P55 chr19:48809424-48810295 - Intergenic
N/A UCSC
Rpl7P56 chr20:52059283-52060022 + Intergenic
N/A UCSC
Rpl7P57 chr20:53457482-53457714 + Intergenic
N/A UCSC
Rpl7P58 chrX:107757999-107758349 + Intragenic
N/A UCSC
Rpl7P59 chrX:139511053-139511826 - Intergenic
N/A UCSC
Rpl7P60 chrX:2172630-2173382 + Intergenic
N/A UCSC
Rpl7P61 chrX:23396212-23396391 - Intragenic
N/A UCSC
Rpl7P62 chrX:68408524-68409277 + Intragenic
N/A UCSC
Rpl7P63 chrX:77617788-77618360 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001100534.1
CATGGAGGCTGTACCAGAGAAGAAAAAGAAGGTTGCCGCTGCGCCAGGAACCCTTAAGAAGAAAAAGGTTCCTGCGGTGCCAGAAACCCTTAAGAAAAAGCGAAGGAATTTCGCAGAGTTGAAGGTCAAGCGCCTGAGGAAGAAGTTTGCCCTGAAGACACTGCGAAAGGCAAGGAGGAAGCTCATCTATGAGAAGGCAAAGCACTATCACAAGGAGTACAGACAGATGTACCGGACTGAGATTCGCATGGCTAGGATGGCGAGGAAAGCTGGCAACTTCTATGTGCCCGCAGAACCAAAATTGGCCTTTGTCATCAGAATCCGAGGTATCAATGGAGTGAGCCCAAAGGTGCGCAAGGTGCTGCAGCTGCTCCGTCTCCGGCAGATCTTCAATGGCACCTTTGTGAAGCTCAACAAGGCTTCAGTGAACATGCTGAGGATCGTGGAGCCCTACATTGCATGGGGGTACCCCAACCTGAAGTCAGTAAACGAGCTCATCTACAAACGAGGCTATGGCAAAATCAATAAAAAGCGCATTGCCTTGACAGATAACTCCTTGGTTGCTCGATCTCTTGGTAAATTTGGCATCATCTGCATGGAGGATCTAATTCATGAGATCTATACAGTTGGAAAACGCTTTAAGGAAGCAAATAACTTCCTGTGGCCCTTCAAACTGTCTTCCCCACGAGGTGGAATGAAGAAAAAGACAACTCACTTTGTAGAAGGTGGAGACGCTGGCAACAGGGAAGACCAGATAAACAGGCTTATTAGACGGATGAACTAAGGTATTGCCCGTGGTATTTTTATAATCTGGTCGGTTAATAAACAGTCACAGCTTGGCAAATTGAAA