Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Chmp5
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name charged multivesicular body protein 5
Also known as RGD1305968
Coordinate chr5:57267312-57284455
Strand +
Gene summary Predicted to be involved in several processes, including cellular response to muramyl dipeptide; midbody abscission; and regulation of cell cycle process. Predicted to act upstream of or within endosome to lysosome transport; lysosome organization; and regulation of receptor recycling. Predicted to be located in cytosol and nucleus. Predicted to be active in multivesicular body. Orthologous to human CHMP5 (charged multivesicular body protein 5). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Chmp5

Retroname Coord Strand Genomic Region ENSG
Chmp5P1 chr2:77771677-77772535 + Intergenic
 N/A UCSC
Chmp5P2 chr8:26280708-26281207 - Intragenic
 N/A UCSC
Chmp5P3 chr12:25155865-25157205 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001025410.1
GGTATTTCTCCAGTGTTTGGGTTTCCTCGCCGCCGGCCGAGATGAACCGATTCTTCGGAAAAGCGAAACCCAAGGCTCCGCCACCTAGCCTGACTGACTGCATTGGGACGGTGGATAGCAGGGCAGAATCCATTGACAAAAAGATTTCCCGGTTGGATGCTGAACTGGTGAAATATAAGGACCAAATCAAGAAGATGAGAGAGGGTCCTGCTAAGAACATGGTCAAACAGAAAGCCCTGAGGGTTTTAAAGCAAAAACGGATGTATGAGCAGCAGCGAGACAACCTTGCCCAACAGTCCTTTAACATGGAGCAAGCTAATTACACCATCCAGTCACTGAAGGATACCAAAACCACGGTTGATGCAATGAAATTGGGAGTAAAGGAAATGAAGAAGGCTTACAAGGAAGTAAAAATTGACCAGATTGAGGATTTACAAGACCAGTTGGAAGACATGATGGAAGATGCAAATGAGATCCAGGAGGCCCTGGGCCGCAGCTACGGCACCCCAGAACTGGATGAGGACGACCTGGAAGCAGAGTTGGATGCGCTGGGCGATGAGCTTCTGGCTGATGAGGACAGCTCTTACTTGGACGAAGCAGCTTCTGCACCGGCAATTCCAGAGGGCGTTCCCACTGACACAAAAAACAAGGATGGAGTGCTGGTGGATGAATTTGGACTGCCACAGATTCCAGCTTCGTAGACTTGGAACATTCCAGTGTGTGATGTAAAAAAAAAAAAAAAGTATTCTGGGACTAGGAAGTATCTCCCAATTTGCCAAACAGATTTACGTTTCTTTCCTTTCTTTGGAGGAAAAGCTAATTACACTGCTCCTGTATTTTTATTTTTTTCCATTAAGGAATTCATTGCTTGGGGGAAGCTGTCTTTACTAAAATTTGATTCTTTTTTTTCCTTAGGAAAGACTAACTGAAAAGTACCTTTGACTTTGTATGACTTGTTTTCATTCATTAACAATAATCTGAAATTAAACCAAGGAGATGAGACTCTAAATTCTATATGGTAGTATGATGATGTATTAATAAGATAAAGATTATTGATGGGGTTGATAGTATTTTCAGAACCATTGTCTATTGTGGTACTGTAGATGGCTTTAAGTGATGGCCTCCTTTGATAGGTTTCGTTGTGTCATGTGAGCAAGTCATTACTCTGTCTACTGTTGGAATGAACTGTCACTACTGCATCATGAGTTACTACTTTGATCCCATGGTTCCCTCGGTAAATAGCCTGACTTGTAATGAATAATGAATATTTCTTGATATTTAATGTATAGGACATTTATTTATACTCAATAAATATTTTTCAAAAGGA