Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Mrto4
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name MRT4 homolog, ribosome maturation factor
Also known as RGD1311709
Coordinate chr5:157814142-157820889
Strand -
Gene summary Predicted to be involved in nuclear-transcribed mRNA catabolic process; rRNA processing; and ribosomal large subunit biogenesis. Predicted to be located in cytoplasm. Predicted to be part of preribosome, large subunit precursor. Predicted to be active in nucleolus. Orthologous to human MRTO4 (MRT4 homolog, ribosome maturation factor). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Mrto4

Retroname Coord Strand Genomic Region ENSG
Mrto4P7 chr19:20015814-20016296 - Intergenic
 N/A UCSC
Mrto4P8 chrX:156349434-156349714 + Intergenic
 N/A UCSC
Mrto4P1 chr2:5158883-5159617 + Intragenic
 N/A UCSC
Mrto4P2 chr3:105158065-105158964 + Intragenic
 N/A UCSC
Mrto4P3 chr3:128480616-128481422 + Intergenic
 N/A UCSC
Mrto4P4 chr6:80008749-80009482 - Intergenic
 N/A UCSC
Mrto4P5 chr9:6693358-6694906 + Intergenic
 N/A UCSC
Mrto4P6 chr10:4670685-4671318 + Intergenic
 N/A UCSC
Mrto4P9 chrX:58667884-58668758 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001106697.1
AGGCCTCAAGCCCCTCCCTCCGGAGAGCCATAGAGAGGAACCGGTTCGCGAGGGCCTTGGTGAAGTGTTCCGGATTCGGAAGCCGCGGCGATCAGGGGGGCCGAAGGGACTGGAAGGCTCTGGAACCTGGGCAGAGAAGTGGCCTTCCAGGCCCTAGGCAGAACGCAGGCAGGGAAGAGAGGGCCCACCACACTTCGGGTCAGGCACACGAGAGAGGCAGCCCCGAGCGCCGCCCCACAAGCCTCTGCGGCACCCGGGTCCTGACGGGCCGCCGGGTCTTCCGCCGCACGTGCCTTTAGCGCGATGCCCAAATCCAAGCGAGACAAGAAAGTTTCCTTAACAAAAACTGCCAAGAAAGGCTTGGAACTGAAGCAGAACCTGATAGAAGAGTAAGTAACACTGGTGTCAGTCACGCCAGTGGAAGCTTAAAGGCCTATGACCGCTTCTCTTGTGTGAGGCCAGAGTTGCCCAGCCCGTGCTGCGCCTCAGCTCCAGAGCCTCATGAATTGTCCCACAGCTTCGGAAATGCGTGGACACCTACAAGTACCTCTTCATCTTCTCTGTGGCCAACATGAGGAACAGCAAGCTGAAGGACATCCGGAATGCCTGGAAGCACAGCCGGATGTTCTTTGGCAAAAACAAGGTGATGATGGTGGCCTTGGGTCGAAGCCCGTCTGATGAATACAAAGACAACCTACATCAGGTCAGCAAGAAGTTGAGAGGTGAAGTTGGGCTCCTTTTTACCAACCGCACGAAGGAGGAGGTGAATGAGTGGTTCACAAAGTATACAGAAATGGATTTTGCTCGAGCGGGGAACAAAGCAACTTTAACTGTGAGCCTGGATCCAGGGCCGCTGAAACAGTTCCCTCATTCCATGGAGCCACAGCTGAGGCAGCTGGGTCTGCCCACTGCCCTCAAGAAAGGTGTGGTGACCTTGCTGTCTGACTATGAAGTGTGCAAGGAGGGTGACGTGCTGACCCCAGAGCAGGCCCGTGTCCTGAAGCTGTTTGGGTATGAGATGGCCGAATTCAAAGTGACCATCAAATACATGTGGGATGCCCAGTCAGGGAGATTCCAGCAGATGGACGATGACCTTCCCGAGAGCGCGCCTGAGTCTgagggggagtctgaggaggaggaggacgaCAGCTGACTCTGGGAACCAGAACCAAGGCCTTCCAGCAAGTACTTCATCTCCACTGGACGCCCCCAGGACTGCTGTCGCCCCCTAGAGGGAGCGGCTGGTTTTTTTGCTATGGATAAAGACAAGGGAGGTGCTGGGCAGTGACTTTGTTTCTATAGAGAATAAAATTTTGTCTGCAGGGTGCTCCCTGTAGACAGCAGAGACTCTTTAT
>XM_006239178.3
GGAGAGCCATAGAGAGGAACCGGTTCGCGAGGGCCTTGGTGAAGTGTTCCGGATTCGGAAGCCGCGGCGATCAGGGGGGCCGAAGGGACTGGAAGGCTCTGGAACCTGGGCAGAGAAGTGGCCTTCCAGGCCCTAGGCAGAACGCAGGCAGGGAAGAGAGGGCCCACCACACTTCGGGTCAGGCACACGAGAGAGGCAGCCCCGAGCGCCGCCCCACAAGCCTCTGCGGCACCCGGGTCCTGACGGGCCGCCGGGTCTTCCGCCGCACGTGCCTTTAGCGCGATGCCCAAATCCAAGCGAGACAAGAAAGTTTCCTTAACAAAAACTGCCAAGAAAGGCTTGGAACTGAAGCAGAACCTGATAGAAGAGCTTCGGAAATGCGTGGACACCTACAAGTACCTCTTCATCTTCTCTGTGGCCAACATGAGGAACAGCAAGCTGAAGGACATCCGGAATGCCTGGAAGCACAGCCGGATGTTCTTTGGCAAAAACAAGGTGATGATGGTGGCCTTGGGTCGAAGCCCGTCTGATGAATACAAAGACAACCTACATCAGGTCAGCAAGAAGTTGAGAGGTGAAGTTGGGCTCCTTTTTACCAACCGCACGAAGGAGGAGGTGAATGAGTGGTTCACAAAGTATACAGAAATGGATTTTGCTCGAGCGGGGAACAAAGCAACTTTAACTGTGAGCCTGGATCCAGGGCCGCTGAAACAGTTCCCTCATTCCATGGAGCCACAGCTGAGGCAGCTGGGTCTGCCCACTGCCCTCAAGAAAGGTGTGGTGACCTTGCTGTCTGACTATGAAGTGTGCAAGGAGGGTGACGTGCTGACCCCAGAGCAGGCCCGTGTCCTGAAGCTGTTTGGGTATGAGATGGCCGAATTCAAAGTGACCATCAAATACATGTGGGATGCCCAGTCAGGGAGATTCCAGCAGATGGACGATGACCTTCCCGAGAGCGCGCCTGAGTCTgagggggagtctgaggaggaggaggacgaCAGCTGACTCTGGGAACCAGAACCAAGGCCTTCCAGCAAGTACTTCATCTCCACTGGACGCCCCCAGGACTGCTGTCGCCCCCTAGAGGGAGCGGCTGGTTTTTTTGCTATGGATAAAGACAAGGGAGGTGCTGGGCAGTGACTTTGTTTCTATAGAGAATAAAATTTTGTCTGCAGGGTGCTCCCTGTAGACAGCAGAGACTCTTTATAAAGGCCTTCGGCTGTGCTCCAGCCTAGTCGGGCTAGGGCTGGGTGGGCCAGCACTGCAGATGGCTGAGAGCACGCCTGGATTTGGGTGTCTTTGTCCGTTTGCTTGCAGTGGGTTTGCTGAGGAAAGTTAATTCTCTGGAAGCTTGATCACTTAAAACATAAATAAGCACACAGATACGTGCAAGCCGGGGGTAAAATATGAGGAACACAGGCTTGCCACAGGGCGGTGGAGGGGATTGGGAGCAAGTGGAGtttgagtcaggttctcactgaagcacagactggtcttgatcttacagtagtttctggcctctgcccctcaagtgctACCACACTTGGCTGACTAGTAGTGATTAGTAGCTGTGTGCTGTGCGAGTCAGTGGTAAGGCATCATAAACCATGCTTAAGGCCAGCAGGTCCCTCCCTGGCAGCACACAGAAACTGAGGAAAGTTGTTGGACCTGTGGGTCAGAAAATCCTCAGAGTTCCTGACCTCTACCCTAGAGGAGGGATGTGGGGGTTAAACAGCAACACTGAATAAGATGGGCCTTGGGTCTTCATAATCATGCCCAAAAAACCCAGGGCAAGCCAATATGATAatgcttggaatgccagcacctcaggaggctgaggtaggattgaaagtttgaggccaagccaggcagagggaggccaatctctgaattggaggccactcatggctaaataaagcctatctcaaaaaaaGTTTGATACCAATCAACTATAAggctgaaaaaaggcaggcttggggaagagcaccgactgctcttccagaggtcctgagttcaattcccagcaaccacatggtggctcacaaccatctgtaatgggatctgatgcccttttctggtgtgtctgaagacagctgtagtgttcttatatataataaataaatcattataggaaaaaaaaaAGGGcaggcttggttgtatgcaccagaaattgaaagctagagacaagagacctgataggagttcaaggccagcctagagtatatggcattttgtcttaaaaagaaaaggccagggtggtggtggctcacacctttaataccagcacttgggaggcagaattcaggacagccagggctacacacagatacattgtctcaaaGGGGAAAGTAAGAAAGACAAGTGACATGTTTCAGCAGACCGAAGCACTTGCTGCCAAATCAATTAAAATGTTGCTTAGTACTCAA