Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Rer1
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name retention in endoplasmic reticulum sorting receptor 1
Also known as RGD1306324
Coordinate chr5:172476746-172488822
Strand -
Gene summary Predicted to enable acetylcholine receptor binding activity. Predicted to be involved in protein retention in ER lumen and retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum. Predicted to act upstream of or within positive regulation of protein localization to plasma membrane and skeletal muscle acetylcholine-gated channel clustering. Predicted to be located in Golgi apparatus; cell surface; and endoplasmic reticulum-Golgi intermediate compartment. Predicted to be integral component of Golgi membrane. Orthologous to human RER1 (retention in endoplasmic reticulum sorting receptor 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rer1

Retroname Coord Strand Genomic Region ENSG
Rer1P1 chr13:110552767-110553262 - Intergenic
 N/A UCSC
Rer1P2 chr13:78734130-78734528 + Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001039012.1
TCCGCAGCCGTGAGGGAGACCGCGGCTCGGCTGCACCGGAGCTGCGAGTTACAGAATGTCTGAAGGGGACAGTGTTGGAGACTCTGTCCATGGGAAGCCCTCAGTGGTGTACAGATTTTTCTCACGGCTTGGACAGATTTATCAGTCCTGGCTGGACAAATCTACCCCCTACACAGCTGTCCGGTGGGTCGTGACACTGGGCCTGAGTTTTGTCTACATGATTAGAGTTTACCTGTTACAAGGTTGGTACATTGTGACCTACGCCTTGGGAATTTACCACCTAAACCTTTTCATAGCGTTCCTTTCTCCCAAAGTGGACCCTTCCTTGATGGAAGACTCAGATGATGGCCCTTCATTACCAACCAAACAAAATGAGGAGTTTCGCCCCTTCATTCGAAGGCTTCCAGAATTCAAATTTTGGCATGCGGCTACAAAAGGCATTCTTGTGGCTATGATCTGTACCTTCTTTGAGGCTTTCAACGTCCCCGTGTTCTGGCCGATCCTGGTGATGTACTTCATCATGCTTTTCTGTATCACAATGAAGAGGCAAATAAAGCACATGATTAAATACCGGTACATACCATTCACACACGGGAAGAGGAGATACAAAGGGAAGGAGGACGTGGGCAAGACATTTGCTAGTTAGAAGCTGGACTGACTGTCACACGGACTCAAGAACGGTTTTGAGCCATTGTAACAATGCCTTTTTCTTCACATAAAGTAGTTGATTATGAGGAAGTTGAATTTTCTTTTTAAGAGGAGCCTCAATGATTTGTATCTGAAATATCAGGTTCTTGAAGAAACTGGCATTTAAACCACATTGCATTGACTTCTTCTTCAGTGATGCTCAGTGTTTGGAATGGGCAGATGGTAGTGAGCCATGGGCTTGTTCAGTGTTTGGAATGGATGATGGTAGTGAGCCATGGGCTTGGGAGGCCAGGTGGGTGGCAGCCCAAGAGCGGAAGGGAGGATGGGAGTGCGGCCCTGCAGAGCTGCCTTCCTGACCCCGCTGAGGCCACTCCTCTGTGCCAGAGGGACACGCCAGCCTGCTTCCTGCTGTGAGAAGGAATGTGCCGCTTTGAGGGTGATTTCACAGAGCTCTGTGGGGTTCTCATGCCAGTGTCTGAATCTCATCTCACTAGAGATGTTTCTCAAATTGGCCTCTTACCATAATGACTCAAAACTCTGTTCTTAACTACCATGATTGCTTTTGAGGGCCTGGAATTATAAATATATATTATATTTTAATTGTTTGA