Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ssu72
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name SSU72 homolog, RNA polymerase II CTD phosphatase
Also known as RGD1307854
Coordinate chr5:173152964-173182720
Strand +
Gene summary Predicted to enable RNA polymerase II CTD heptapeptide repeat phosphatase activity. Predicted to be involved in dephosphorylation of RNA polymerase II C-terminal domain; mRNA polyadenylation; and termination of RNA polymerase II transcription. Predicted to be located in cytosol and nucleoplasm. Predicted to be part of mRNA cleavage and polyadenylation specificity factor complex. Orthologous to human SSU72 (SSU72 homolog, RNA polymerase II CTD phosphatase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ssu72

Retroname Coord Strand Genomic Region ENSG
Ssu72P1 chr15:110389867-110390588 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001025657.1
CAGGAGCTGTGACGTCAGGTGCCGGCAAAGGTGGTCCACGACCGCAGGCCTTAGCTGCTCTCAAACAGATTCAGCGTTGGCCGGTCGCTCTCCCGCGCCGCTTGCAGTGCGGGCCCAGGAAAGCACCGTCGGCCTCCCCACGCGTTACGTCGCCCTCATTTCCGCATCGCTGATTTCCGGTTACCGCCATCTTCCTCGCGCGGAAGCCGGCTTCTAGGTGGGAGAGCTCCGTAGTGAGTGCAGTGGGTAGTTCGGTCGGTGCCATGCCGTCATCGCCGCTGCGGGTGGCGGTGGTGTGCTCGAGTAACCAGAATCGGAGCATGGAAGCACACAACATCCTCAGCAAACGTGGTTTCAGTGTCCGCTCCTTTGGAACAGGAACTCATGTGAAGCTCCCAGGACCAGCACCTGACAAGCCCAATGTTTATGACTTCAAAACCACATATGACCAGATGTACAATGATCTCCTCAGGAAAGACAAAGAACTCTATACACAAAATGGAATTCTACATATGTTGGACAGAAATAAAAGGATCAAGCCCCGTCCAGAAAGATTCCAGAACTGCAAAGACCTGTTTGACCTGATCCTCACTTGTGAAGAGAGAGTCTATGACCAGGTTGTAGAAGATCTGAACTCCAGGGAACAGGAGACCTGCCAGCCAGTGCATGTGGTCAATGTGGACATCCAGGACAACCATGAAGAGGCCACCCTGGGAGCATTCCTTATCTGCGAGCTCTGCCAGTGTATCCAGCACACCGAGGATATGGAGAATGAAATCGATGAGCTGCTGCAGGAGTTTGAGGAGAAGAGTGGCCGGGCCTTTCTGCATACTGTCTGCTTCTACTGAGCCATCCCGCTTGGTGCATGGCCTGGCACCACCAAGCCACCTTTGCTGAAGTCACTTTTTCCATGTGTTTTCCCTGCTACGTGTACATCACCAATGTACTGTACATATAGAGTGAGACATACACAGAAATGCCAGATTCAAAACCATTGTTTTTAACCAAAAGAAATAAAGATGGTTTACTCTACACCCTA