Summary

Gene Name	Fcf1
Specie	Rattus norvegicus
Full Name	Fcf1 rRNA-processing protein
Also known as	RGD1310899
Coordinate	chr6:108796182-108808051
Strand	+
Gene summary	Predicted to act upstream of or within endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to be part of small-subunit processome. Predicted to be active in nucleolus. Orthologous to human FCF1 (FCF1 rRNA-processing protein). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Fcf1

Retroname	Coord	Strand	Genomic Region	ENSG
Fcf1P1	chr2:199141408-199142074	-	Intergenic	N/A	UCSC
Fcf1P2	chr8:103204129-103204560	+	Intergenic	N/A	UCSC
Fcf1P3	chr10:100161204-100161718	-	Intergenic	N/A	UCSC
Fcf1P4	chr11:88949134-88949827	+	Intragenic	N/A	UCSC
Fcf1P5	chr18:84946379-84946547	+	Intergenic	N/A	UCSC

Expression

Transcript Sequences

>NM_001044235.2

GAAACAGGAGTGCGTCGAGAACATGGGGAAGCAAAAGAAAACAAGGAAATATGCGACTATGAAGCGAATGCTTAGTCTAAGAGATGAGCGACTTAAAGAAAAGGATAGGTTGAAGCCTAAAAAGAAAGAAAAGAAAGATCCTAGTGCGCTGAAGGAAAGAGAAGTCCCCCAGCATCCTTCCTGCTTGTTCTTCCAGTATAATACACAGCTGGGTCCACCTTACCACATCCTGGTGGATACCAACTTCATCAACTTTTCCATTAAAGCCAAACTGGACTTAGTGCAGTCAATGATGGACTGTCTGTACGCCAAGTGTATCCCTTGTATAACCGATTGTGTAATGGCTGAAATTGAGAAATTAGGACAGAAGTATCGTGTGGCACTAAGAATCGCCAAAGATCCCCGATTTGACCGATTGCCATGCACACACAAAGGAACCTATGCCGATGACTGCCTGGTGCAGAGGGTAACTCAGCACAAGTGTTACATTGTGGCCACAGTTGACCGTGACCTCAAACGAAGAATCCGGAAGATCCCTGGTGTCCCAATCATGTACCTTTCTAACCACAGATACAACATCGAGCGGATGCCAGATGATTATGGAGCCCCTCGCTTCTAATTCTCACTCCACAGAATCTGCCTGCTGTTCTTGGACCAGCTTTCTCTCATCAATTAATTAAACACTTTCTGATTTTTAAA