Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Hsp90aa1
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name heat shock protein 90 alpha family class A member 1
Also known as Hsp86|Hsp90|Hspca
Coordinate chr6:135107262-135112793
Strand -
Gene summary Enables several functions, including Rho GDP-dissociation inhibitor binding activity; nucleotide binding activity; and sulfonylurea receptor binding activity. Involved in several processes, including cardiac muscle cell apoptotic process; positive regulation of lamellipodium assembly; and positive regulation of protein import into nucleus. Located in several cellular components, including basolateral plasma membrane; brush border membrane; and sperm mitochondrial sheath. Part of protein-containing complex. Biomarker of portal hypertension. Orthologous to human HSP90AA1 (heat shock protein 90 alpha family class A member 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Hsp90aa1

Retroname Coord Strand Genomic Region ENSG
Hsp90aa1P1 chr1:13006971-13009119 + Intergenic
N/A UCSC
Hsp90aa1P2 chr1:89826570-89826885 - Intergenic
N/A UCSC
Hsp90aa1P3 chr2:9166579-9167890 + Intragenic
N/A UCSC
Hsp90aa1P4 chr2:963396-964665 - Intergenic
N/A UCSC
Hsp90aa1P5 chr4:148617206-148620082 + Intergenic
N/A UCSC
Hsp90aa1P6 chr7:121695030-121695431 + Intragenic
N/A UCSC
Hsp90aa1P7 chr7:72060099-72060408 - Intragenic
N/A UCSC
Hsp90aa1P8 chr9:106325318-106326573 + Intergenic
N/A UCSC
Hsp90aa1P9 chr10:5873325-5873820 - Intragenic
N/A UCSC
Hsp90aa1P10 chr12:10752403-10754948 + Intergenic
N/A UCSC
Hsp90aa1P11 chr13:22533576-22534825 - Intragenic
N/A UCSC
Hsp90aa1P12 chr13:6343401-6347573 - Intragenic
Intragenic
N/A UCSC
Hsp90aa1P13 chr18:38683956-38684256 - Intergenic
N/A UCSC
Hsp90aa1P14 chr18:67360935-67361974 - Intragenic
N/A UCSC
Hsp90aa1P15 chr19:36062901-36064169 - Intergenic
N/A UCSC
Hsp90aa1P16 chrX:66387099-66387543 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_175761.2
AGTTGCTTCAGTGTCCCGGTGCGGTTAGTCACGTTTCGTGCGTGCTCATTCTGCCAAGATGCCTGAGGAAACCCAGACCCAAGACCAACCAATGGAGGAAGAGGAGGTCGAAACCTTTGCCTTTCAGGCAGAAATTGCCCAGTTAATGTCCTTGATCATCAACACTTTCTACTCGAACAAAGAGATCTTTCTGAGGGAGCTCATTTCCAACTCCTCAGACGCTCTGGATAAGATCAGATACGAGAGCTTGACCGACCCTAGTAAACTGGACTCGGGGAAGGAGCTGCACATTAATCTCATTCCCAACAAGCAAGACCGAACCCTCACTATTGTGGATACTGGCATTGGAATGACCAAGGCTGACTTGATCAATAACCTTGGCACTATTGCCAAGTCAGGCACCAAAGCCTTCATGGAGGCTTTGCAGGCTGGTGCAGATATCTCTATGATTGGCCAGTTTGGTGTTGGTTTTTACTCTGCGTATTTGGTTGCTGAGAAAGTGACTGTCATCACCAAGCATAATGATGACGAGCAGTACGCCTGGGAGTCCTCAGCTGGAGGATCCTTCACTGTGAGGACAGACACAGGTGAACCAATGGGTCGTGGAACAAAGGTTATCTTGCATCTAAAAGAAGACCAAACTGAGTATTTGGAGGAAAGGAGAATAAAAGAAATTGTGAAGAAACATTCTCAGTTTATTGGCTACCCCATTACTCTCTTTGTGGAGAAGGAACGTGACAAGGAAGTCAGTGATGATGAGGCTgaagaaaaggaagagaaagaggaagagaaagaaaaagaagaaaaggagtctgatgacaagcctgaaatagaagatgttggttctgatgaagaagaagaagagaagaaggatggtgacaagaagaaaaagaagaagataaaggaaaagtacattgatcaagaagaaCTCAACAAAACAAAGCCGATCTGGACCAGAAATCCTGATGACATTACGAATGAAGAATACGGAGAGTTCTACAAGAGCTTAACCAACGACTGGGAAGAACATTTGGCAGTAAAGCATTTTTCTGTTGAAGGACAATTAGAATTCCGGGCTCTTCTTTTTGTCCCAAGACGCGCTCCTTTTGATCTATTTGAAAACAGAAAGAAAAAGAACAACATCAAGTTGTATGTTCGCAGAGTTTTTATCATGGATAACTGTGAGGAGTTAATCCCCGAGTATCTGAATTTCATCAGAGGGGTGGTGGATTCTGAGGATCTCCCTCTAAATATTTCCCGTGAAATGCTGCAACAAAGCAAAATTCTGAAAGTTATCAGGAAGAATTTGGTCAAGAAATGCCTAGAACTATTTACTGAACTGGCTGAAGATAAAGAGAACTACAAAAAGTTTTATGAGCAGTTCTCAAAAAATATAAAGCTTGGAATTCATGAAGACTCTCAAAATCGGAAGAAGCTTTCAGAGCTGTTGAGATACTACACATCTGCTTCTGGGGATGAGATGGTTTCTCTGAAGGACTACTGCACCAGAATGAAGGAAAACCAGAAGCACATCTATTTTATCACAGGTGAGACCAAGGACCAGGTTGCTAACTCAGCCTTTGTGGAACGTCTCCGAAAGCATGGCTTAGAAGTAATCTATATGATTGAGCCCATTGATGAGTATTGTGTGCAACAGCTGAAGGAATTTGAGGGCAAGACCTTGGTGTCAGTTACCAAAGAAGGACTGGAACTTCCAGaagatgaagaggaaaagaagaaacaggaagagaaaaagacaaAATTTGAGAACCTCTGCAAAATTATGAAGGATATTTTAGAGAAAAAGGTTGAAAAGGTGGTTGTGTCAAACCGATTGGTGACATCCCCATGCTGTATTGTCACAAGCACATATGGCTGGACAGCAAACATGGAGAGAATCATGAAAGCTCAAGCCCTCAGAGACAACTCAACAATGGGTTACATGGCAGCAAAGAAACACCTGGAGATAAACCCTGATCACTCCATTATTGAAACCTTAAGGCAAAAGGCAGAGGCTGACAAGAATGACAAGTCTGTGAAAGATCTGGTCATCTTGCTGTACGAAACAgcactcctgtcttccggcttcagtctggaagatccccagacccatgctaacaggatctacaggatgatcaagcttggtctagGTATTGATGAGGATGATCCTACTGTGGATGATACCAGTGCTGCTGTAACTGAAGAAATGCCACCCCTGGAAGGAGATGATGACACATCACGCATGGAAGAAGTAGACTAGGCTTCACCAGAACTATGTGTTTGATGCTTACCTTCATTCCTTCTGATAATATATTTTCCATGATTTTTGTTTATTTTTGTTAACATTTAAAACATCTGTGTGGCATGAAAACTAGGGGAAGGTAAAAATTTCTACATGTGATACTGTGATACTATAGGTTTGACTCAAGAGGTTGATAGAACGTTTGTTGTAAGACGTAATGTAACCTACTGTTACTGTTAACTATGTGGTCTGAAGTGTTTAGCTGTTGAGCTGGATTCCTTTAGTAGACCAAATTAAGATGACTTAAGTTTCATCTTAAATTTTTTTCATTCCCTGTAGTTAATTCTGCATGTACTAGTCTTAGAAGTAAACACAAGCTAAAACAACTTGACAGGAATTCCCCAAGTGGCTTGTTTTCCAAAGTACTGAGAACAAAACCCTAAGTTCCCCTAGGTCTTGTAACTCAGCAAGGCTTGTGAATGTGAAAATAACAGTGCCCAATCACATTCTGCTTTAAAAAGGTAAATACAGATGAGATAAAAA