Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl3
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein L3
Also known as -
Coordinate chr7:121297365-121302739
Strand -
Gene summary Enables 5S rRNA binding activity. Predicted to be involved in ribosomal large subunit assembly. Predicted to act upstream of or within cellular response to interleukin-4. Located in ribosome. Part of cytosolic large ribosomal subunit. Is active in synapse. Orthologous to human RPL3 (ribosomal protein L3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl3

Retroname Coord Strand Genomic Region ENSG
Rpl3P1 chr1:158339070-158340308 - Intergenic
N/A UCSC
Rpl3P2 chr4:48527364-48528606 + Intragenic
N/A UCSC
Rpl3P3 chr6:133965842-133967088 + Intergenic
N/A UCSC
Rpl3P4 chr10:15448344-15449225 - Intergenic
N/A UCSC
Rpl3P5 chr11:55991071-55992050 - Intergenic
N/A UCSC
Rpl3P6 chr14:5185785-5186085 + Intragenic
N/A UCSC
Rpl3P7 chr18:17963285-17964587 + Intragenic
N/A UCSC
Rpl3P8 chrX:15854563-15855806 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_198753.2
CTCTATCGGCGGCGTGTGGCGGCGAGATGTCTCACAGGAAATTCTCAGCTCCTAGGCATGGGTCCTTGGGCTTCTTGCCTCGGAAGCGCAGCAGCCGGCATCGTGGAAAAGTGAAGAGCTTCCCTAAGGATGACCCTTCCAAGCCTGTTCACCTCACAGCCTTCCTAGGGTACAAGGCTGGCATGACCCACATTGTCCGGGAAGTTGACCGGCCAGGATCTAAGGTGAATAAGAAAGAAGTTGTGGAGGCTGTGACCATTGTGGAAACCCCACCCATGGTGGTTGTGGGTATTGTGGGATATGTAGAAACCCCACGAGGCCTCCGGACCTTCAAGACTGTATTTGCTGAGCACATCAGCGATGAGTGTAAAAGGCGTTTCTATAAGAATTGGCACAAATCTAAGAAGAAGGCTTTTACCAAGTACTGTAAGAAATGGCAAGATGACACAGGCAAGAAGCAGCTGGAGAAGGACTTCAACAGCATGAAGAAGTACTGCCAGGTCATCCGCATAATTGCTCACACTCAGATGCGCCTGCTTCCTCTGCGCCAGAAGAAGGCACACTTGATGGAGATCCAGGTGAATGGGGGCACTGTAGCTGAGAAGCTAGACTGGGCCCGAGAGAGGCTGGAGCAGCAGGTCCCTGTGAACCAGGTGTTTGGGCAAGATGAGATGATTGACGTCATTGGCGTGACAAAGGGCAAAGGCTACAAAGGGGTGACCAGTCGTTGGCATACAAAGAAGCTGCCCCGAAAGACCCACAGAGGTCTGCGCAAAGTTGCTTGTATTGGAGCTTGGCATCCTGCCCGTGTAGCCTTCTCTGTGGCTCGAGCTGGGCAGAAAGGCTACCATCACCGAACAGAGATCAACAAGAAGATTTACAAGATTGGTCAAGGCTACCTCATCAAGGATGGTAAGCTGATCAAGAACAATGCATCTACTGACTACGACCTGTCTGACAAGAGCATCAACCCACTGGGTGGCTTTGTCCATTATGGTGAGGTGACCAATGACTTCATCATGCTCAAAGGCTGTGTGGTGGGAACCAAGAAGCGAGTGCTTACTCTCCGGAAGTCCTTGCTGGTCCAGACCAAGCGTCGGGCTCTTGAGAAGATTGACCTGAAGTTCATTGACACCACCTCCAAATTCGGACATGGTCGCTTCCAGACCATGGAGGAAAAGAAAGCATTCATGGGACCGCTCAAGAAAGATCGCATTGCCAAGGAGGAAGGTGCCTGATGCCAGGAGTACTTTGTGCAGCTGGTGGGGTCTCATCAATAAAATATTT