Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Snu13
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name small nuclear ribonucleoprotein 13
Also known as Nhp2l1|Otk27
Coordinate chr7:123282754-123287721
Strand -
Gene summary Predicted to enable ATPase binding activity and RNA binding activity. Predicted to contribute to snoRNA binding activity. Predicted to be involved in RNA processing and box C/D snoRNP assembly. Predicted to act upstream of or within single fertilization. Predicted to be located in dense fibrillar component. Predicted to be part of several cellular components, including U2-type precatalytic spliceosome; box C/D RNP complex; and spliceosomal snRNP complex. Orthologous to human SNU13 (small nuclear ribonucleoprotein 13). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Snu13

Retroname Coord Strand Genomic Region ENSG
Nhp2l1P1 chr1:281863827-281864408 + Intergenic
N/A UCSC
Nhp2l1P2 chr1:84577942-84578300 - Intragenic
N/A UCSC
Nhp2l1P3 chr2:139676184-139676436 - Intragenic
N/A UCSC
Nhp2l1P4 chr2:257735553-257736020 + Intragenic
N/A UCSC
Nhp2l1P5 chr4:143266845-143267338 - Intragenic
N/A UCSC
Nhp2l1P6 chr5:111905210-111905673 + Intergenic
N/A UCSC
Nhp2l1P7 chr9:59213378-59213834 + Intergenic
N/A UCSC
Nhp2l1P8 chr10:25145499-25145903 - Intergenic
N/A UCSC
Nhp2l1P9 chr12:19282688-19283084 + Intergenic
N/A UCSC
Nhp2l1P10 chrX:152781081-152781632 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_212515.2
CTTCCGCTCCCGCCACTCCTGGAGTGGTTTCCGCTGCTTTTTCTGCGCGACGTTTCTGTCTGTCTGAGGTGGGCTGTTGTGAAGTCTCGGTGAGGCCTGCGCACCGCAGCCATGACGGAGGCTGATGTGAACCCAAAGGCCTATCCCCTCGCAGATGCCCACCTCACCAAGAAGCTGCTGGACCTTGTTCAGCAGTCGTGTAACTACAAGCAGCTTCGGAAAGGAGCCAATGAAGCCACCAAAACCCTCAACAGAGGCATCTCTGAGTTCATTGTGATGGCAGCAGACGCTGAGCCCTTGGAGATCATCCTGCACCTCCCTCTGCTGTGTGAAGACAAGAATGTCCCCTATGTATTTGTACGCTCCAAGCAGGCTTTAGGACGGGCCTGTGGAGTCTCCAGGCCGGTCATCGCCTGTTCTGTAACCATCAAAGAAGGCTCTCAACTAAAGCAGCAGATCCAATCCATTCAGCAGTCTATTGAGCGGCTCCTGGTGTAGGCCGTGGCCTCTGCCCTCTCCTATCTCCTCCCTCCCTGAGTTTGTGTATCATGTCTGTTAGCGTGTACTGTTTTCAGCCAGTTTCTATTATATTGTGCTACATC