Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Pclaf
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name PCNA clamp associated factor
Also known as Ns5atp9|PAF15|Paf
Coordinate chr8:71514281-71526182
Strand +
Gene summary Predicted to enable chromatin binding activity. Predicted to be involved in several processes, including cellular macromolecule biosynthetic process; centrosome cycle; and response to UV. Predicted to be located in centrosome and perinuclear region of cytoplasm. Predicted to be active in nucleus. Orthologous to human PCLAF (PCNA clamp associated factor). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pclaf

Retroname Coord Strand Genomic Region ENSG
Ns5atp9P1 chr4:125652152-125652459 - Intergenic
N/A UCSC
Ns5atp9P2 chr8:116644048-116644369 + Intergenic
N/A UCSC
Ns5atp9P3 chr8:53323606-53323936 - Intragenic
N/A UCSC
Ns5atp9P4 chr9:120665492-120665811 + Intergenic
N/A UCSC
Ns5atp9P5 chr9:82093608-82093930 + Intergenic
N/A UCSC
Ns5atp9P6 chr11:81338049-81338228 - Intragenic
N/A UCSC
Ns5atp9P7 chr15:92114724-92115032 - Intergenic
N/A UCSC
Ns5atp9P8 chr18:86041551-86041861 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_201418.1
ATGGTTCGGACCAAAGCAAACTACGTCCCAGGAGCCTACAGAAAAGTGGTGGCTTCTCAAGCCCCTAGGAAGGTGCTTGGCTCCTCCACCTTTGTCACCAATTCTTCCGGTTCGTCGAGAAAAGCTGAAAATAAGTATGCTGGAGGGAACCCAGTCTGTGTGCGCCCAACTCCCAAGTGGCAAAAAGGCATCGGGGAATTCTTCAGGTTGTCCCCTAAAGATTCTAAAAAAGAAAACCAGATTCCTGAAGAAGCAGGAAGCAGTGGCTTAGGAAAAGCAAAGAGAAAAGCATGTCCTTTGCAACCTGATCACAGAGATGATGAAAATGAATAG