Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Hsp90ab1
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name heat shock protein 90 alpha family class B member 1
Also known as HSP90-BETA|HSP90B|HSPC2|Hspcb
Coordinate chr9:17817791-17823163
Strand +
Gene summary Enables nucleotide binding activity; sulfonylurea receptor binding activity; and transmembrane transporter binding activity. Involved in several processes, including negative regulation of complement-dependent cytotoxicity; positive regulation of protein import into nucleus; and regulation of cellular protein metabolic process. Located in several cellular components, including basolateral plasma membrane; brush border membrane; and ooplasm. Biomarker of muscular atrophy; pancreatitis; and pulmonary fibrosis. Human ortholog(s) of this gene implicated in multiple sclerosis. Orthologous to human HSP90AB1 (heat shock protein 90 alpha family class B member 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Hsp90ab1

Retroname Coord Strand Genomic Region ENSG
Hsp90ab1P1 chr1:113488949-113491199 - Intragenic
N/A UCSC
Hsp90ab1P2 chr1:130025681-130026011 - Intergenic
N/A UCSC
Hsp90ab1P3 chr2:17212615-17214391 - Intergenic
N/A UCSC
Hsp90ab1P4 chr2:177649634-177650627 + Intergenic
N/A UCSC
Hsp90ab1P5 chr2:229799235-229801028 - Intergenic
N/A UCSC
Hsp90ab1P6 chr2:72962674-72963707 + Intergenic
N/A UCSC
Hsp90ab1P7 chr2:79568763-79571027 + Intergenic
N/A UCSC
Hsp90ab1P8 chr3:40600799-40603136 + Intragenic
N/A UCSC
Hsp90ab1P9 chr3:88016684-88018664 + Intergenic
N/A UCSC
Hsp90ab1P10 chr3:89145874-89148195 + Intergenic
N/A UCSC
Hsp90ab1P11 chr5:122577382-122577968 + Intragenic
N/A UCSC
Hsp90ab1P12 chr5:35774653-35775665 + Intergenic
N/A UCSC
Hsp90ab1P13 chr6:80983937-80985241 - Intergenic
N/A UCSC
Hsp90ab1P14 chr8:38912841-38913085 - Intergenic
N/A UCSC
Hsp90ab1P15 chr8:40570663-40572671 + Intergenic
N/A UCSC
Hsp90ab1P16 chr8:90774860-90777098 + Intergenic
N/A UCSC
Hsp90ab1P17 chr9:32653069-32659107 + Intergenic
N/A UCSC
Hsp90ab1P18 chr9:50077469-50079800 - Intergenic
N/A UCSC
Hsp90ab1P19 chr11:35295101-35297395 + Intergenic
N/A UCSC
Hsp90ab1P20 chr14:69937847-69939635 - Intergenic
N/A UCSC
Hsp90ab1P21 chr14:87078274-87079601 - Intergenic
N/A UCSC
Hsp90ab1P22 chr15:63741809-63742046 + Intergenic
N/A UCSC
Hsp90ab1P23 chr19:36520155-36522460 + Intergenic
N/A UCSC
Hsp90ab1P24 chrX:103575403-103575766 + Intergenic
N/A UCSC
Hsp90ab1P25 chrX:131965841-131966018 - Intergenic
N/A UCSC
Hsp90ab1P26 chrX:132780341-132780518 - Intergenic
N/A UCSC
Hsp90ab1P27 chrX:159604753-159606726 + Intergenic
N/A UCSC
Hsp90ab1P28 chrX:63682876-63684578 + Intergenic
N/A UCSC
Hsp90ab1P29 chrX:88721271-88723468 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001004082.3
CCGGGCCCACCCTGCTCTGTACTACTACTCGGCTTTCTCGTCAAGATGCCTGAGGAAGTGCACCATGGAGAGGAAGAGGTGGAGACCTTCGCCTTTCAGGCAGAAATTGCCCAGCTGATGTCCCTCATCATCAACACTTTCTACTCAAACAAAGAGATTTTCCTCCGGGAGTTGATCTCTAATGCTTCTGATGCCCTGGACAAGATTCGGTATGAGAGCCTGACTGACCCTTCCAAGTTGGACAGCGGGAAAGAGCTGAAGATTGACATCATCCCCAACCCTCAGGAACGCACGCTGACTTTGGTGGACACAGGCATTGGCATGACCAAGGCTGACCTCATAAATAACTTGGGAACCATTGCTAAGTCTGGTACAAAGGCGTTCATGGAGGCTCTCCAGGCTGGTGCAGACATCTCCATGATTGGGCAGTTTGGTGTCGGCTTCTACTCTGCCTACCTGGTGGCAGAGAAAGTGGTTGTGATCACGAAGCACAACGATGATGAGCAGTATGCCTGGGAGTCTTCTGCTGGTGGATCCTTCACTGTCCGTGCAGACCACGGTGAGCCCATTGGCCGGGGTACCAAAGTGATCCTTCACCTCAAAGAAGACCAGACAGAGTACTTAGAGGAGAGGAGGGTCAAGGAGGTGGTGAAGAAACACTCACAGTTCATAGGCTACCCCATCACCCTCTATCTggagaaggaacgcgagaaggagatcagtgatgatgaggcagaggaagagaaaggggagaaggaggaggaagataaggaggatgaggagaagCCTAAGATTGAGGATGTGGGATCTGATGAGGAGGATGACAGCGGCaaagataagaaaaagaaaacaaagaagatcaaggagaagTACATTGACCAGGAAGAGCTGAATAAGACGAAGCCCATCTGGACCAGAAATCCTGATGACATCACTCAAGAGGAATATGGTGAATTCTACAAGAGCCTCACCAATGACTGGGAAGACCACTTGGCAGTCAAGCACTTCTCTGTAGAAGGGCAGTTGGAATTCAGGGCATTGCTCTTCATTCCCCGGCGAGCTCCCTTTGACCTCTTTGagaacaagaagaagaagaacaaCATCAAATTGTATGTCCGTCGTGTGTTCATCATGGACAGCTGTGATGAGCTGATACCTGAGTACCTCAACTTCATCCGTGGTGTGGTTGATTCCGAGGACCTGCCTCTGAACATCTCCCGAGAAATGCTCCAGCAGAGCAAGATCCTGAAAGTCATCCGCAAAAACATTGTGAAGAAGTGCCTTGAGCTCTTCTCTGAGTTGGCTGAAGACAAAGAGAACTACAAGAAATTTTATGAGGCATTCTCTAAGAATTTAAAGCTTGGAATCCATGAGGATTCCACTAACCGTCGCCGCCTCTCTGAGCTCCTTCGCTACCATACCTCTCAGTCTGGAGATGAGATGACTTCCCTGTCAGAGTATGTGTCTCGCATGAAGGAGACACAGAAGTCCATCTACTATATCACTGGTGAGAGCAAAGAGCAGGTGGCCAACTCTGCCTTCGTGGAGCGTGTGCGGAAACGGGGCTTTGAGGTGGTATACATGACTGAGCCCATTGATGAGTACTGCGTACAGCAGCTCAAGGAGTTCGATGGCAAGAGCCTGGTCTCCGTGACCAAGGAGGGCCTGGAGCTACCAGAGGATGAGGAAGAGAAGAAAAAAATGGAGGAGAGCAAGGCAAAGTTTGAGAATCTCTGCAAGCTCATGAAGGAGATCTTGGACAAGAAGGTTGAAAAAGTGACTATCTCCAATAGGCTTGTGTCTTCCCCCTGCTGCATTGTGACCAGCACCTACGGCTGGACAGCCAACATGGAACGGATTATGAAGGCCCAGGCACTGCGGGACAACTCGACAATGGGCTACATGATGGCCAAGAAACACCTAGAGATCAACCCTGACCACCCCATTGTGGAGACTCTGCGGCAGAAGGCTGAGGCAGACAAAAACGACAAAGCTGTCAAAGACCTGGTGGTGCTGCTGTTTGAGACTGCTCTGCTCTCCTCTGGCTTCTCACTTGAGGACCCCCAAACCCACTCCAACCGCATCTACCGCATGATTAAACTAGGCCTGGGCATTGATGAAGATGAGGTCACTGCAGAAGAGCCCAGTGCTGCTGTTCCCGATGAGATCCCCCCACTGGAGGGTGATGAGGATGCCTCTCGCATGGAAGAAGTGGATTAAAGGCTCCTGGGAAGCCCCCGCCCTCTGTATAGTATCCCTGTGGCTCCCCCAACAGCCTTGACTGGCCCTGACCCACCTGGCTCTCTGCTCATGTCTACAAGAATCTCTTCTATCCTGT