Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Sumo1
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name small ubiquitin-like modifier 1
Also known as -
Coordinate chr9:66453428-66483614
Strand -
Gene summary Predicted to enable enzyme binding activity; potassium channel regulator activity; and protein tag. Predicted to be involved in several processes, including negative regulation of protein import into nucleus; protein stabilization; and regulation of ion transmembrane transporter activity. Predicted to act upstream of or within PML body organization; protein localization to nuclear pore; and regulation of transcription, DNA-templated. Located in several cellular components, including XY body; dendrite; and fibrillar center. Colocalizes with PML body and heterochromatin. Human ortholog(s) of this gene implicated in orofacial cleft 10. Orthologous to human SUMO1 (small ubiquitin like modifier 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Sumo1

Retroname Coord Strand Genomic Region ENSG
Sumo1P1 chr4:155206067-155207187 + Intergenic
 N/A UCSC
Sumo1P2 chr11:69249991-69251089 + Intragenic
 N/A UCSC
Sumo1P3 chr17:43110107-43111104 - Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001009672.1
CCGCTGTGGTGCGGAGACCCCCGGGTGAATCCACCGACACCATGTCTGACCAGGAGGCAAAACCTTCAACTGAGGACTTAGGAGATAAGAAAGAAGGAGAATACATTAAACTCAAAGTTATTGGACAGGACAGCAGTGAGATCCATTTCAAAGTGAAAATGACAACACATCTCAAGAAGCTCAAAGAATCGTACTGTCAAAGACAGGGAGTTCCAATGAATTCACTCAGGTTTCTCTTTGAAGGTCAGAGAATTGCTGATAATCATACTCCAAAAGAACTGGGAATGGAGGAAGAAGACGTGATTGAAGTTTATCAGGAACAAACGGGGGGTCACTCGACGGTTTAGATAATTctttttattttttattttttccttttccctcaatccttttttatttttAAAAATAGTTCTTTTGTAATGTGGTGTTCAAAATGAAAATTGAATACTGGCACTCCATCTCTTAGAACATCTGGTAATCTGAATTCTAGTGTTCAATATTCATTATTGGTTGTTTTTGTTGTGCTGATTTTTGGTGATCAGACCTCAGCTCCCTTAACATTGCCCTTCTTCCTTTAAGAGATTTCATGTGTGCACACAGAGAGGCCACCCTTTCCAGGACTGTGCATTTTCAGGGTTGTGATGATAAAAGGATCGACTAATGGGAGCTTCCCTGTGACCTTTCAATGGCCCTGCAGTTCCGGTATGTGGTTGCTTCACTCCTGGACTATGATTTTCAGTGGGAGATGGAGATTTTTCAGAGAACCGAACTGTGGAAAATGACCTTTTCTCAGCTTGAAGCTACTTTTAAAATCTGAGGGTCTGGACCAAAAGAAGAACATCATGTTTGTAGTCAAGGTAACAGATACAGTGAGAGTAACAGCTAACTCCAAAAGTGGCTTCACTGGAGAGAAAGAAAGTGTCTTGAGCAAGACAGTATTGTCAGAAGATCCCAGGAAAGTTCTAATCTTCATCAGCAGTTAATAATAAAGTTACTCATACAGAAGTGTACGCAACAGACACTGCTCCTTTTGATTCTGTTGTACTTTTTGGCCTGGGACATGGGTTTTCAAGGGACATCATCTGTACCAGCTTCATTAAAATAAACAATATTTGTAAAAACCGTA