Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rtraf
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name RNA transcription, translation and transport factor
Also known as LRRGT00192|RGD1304704
Coordinate chr15:4882925-4893890
Strand +
Gene summary Predicted to enable RNA binding activity; RNA polymerase II complex binding activity; and identical protein binding activity. Predicted to be involved in negative regulation of protein kinase activity; positive regulation of transcription by RNA polymerase II; and tRNA splicing, via endonucleolytic cleavage and ligation. Predicted to be located in microtubule cytoskeleton; nucleoplasm; and perinuclear region of cytoplasm. Predicted to be part of tRNA-splicing ligase complex. Orthologous to human RTRAF (RNA transcription, translation and transport factor). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rtraf

Retroname Coord Strand Genomic Region ENSG
RGD1304704P1 chr14:41407447-41407834 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001047874.1
ATGTTCCGACGCAAGCTCACGGCCCTGGATTACCACAACCCCACAGGCTTCAACTGCAAAGCCCGCCTGAACCAGGACCCAAACACGGCGGCCGCTGCCCGGCGGCGTTCGGCACGCTTCCCGGCCCCGAGGCGGCTCAGCGGGCACCTGCTGGGGCAGCAGGATGAAACAGAGTTTAGAAACTTTATCGTTTGGCTTgaagaccagaagatcagacactacaagattgaagacagaGGTAACTTGAGAAACATCCACAGCAGTGACTGGCCCAAGTTCTTTGAAAAGTATCTCAGAGATGTTAACTGTCCTTTCAAGATCCAGGACCGGCAAGAAGCCATTGACTGGCTCCTTGGCTTAGCTGTTAGGCTTGAATATGGAGACAACGCTATTGATGTTCTTCTGTTATCGGAAGCTTTTGAATTTGGTGCCCGTGGAAAAGCTGAAAAGTACAAGGACTCAGTGCCTGACAACAGGAAAAACGCTGACAACGCAGCTAAAAACTCGGAGCCATTGATCAACCTGGACGTAAACAATCCTGATTTTAAGGCGGGTGTCATGGCTCTGGCTAACCTCCTTCAGATTCAGCGTCACGATGACTACTTGGTAATGCTGAAGGCAATTCGAATTTTGGTTCAGGAACGGCTAACACAGGATGCAGTTGCTAAAGCAAATCAAATGAAAGAGGGCTTACCTGTTGCTTTAGACAAACATATTCTTGGCTTTGACACAGGCGATGCAGTTCTTAATGAAGCTGCTCAGATCCTGCGGTTGCTACACATAGAAGAGCTCAGAGAGCTACAGACGAAAATTAATGAAGCCATAGTAGCCGTTCAGGCCATCATTGCTGATCCAAAGACAGACCACAGACTGGGGAAAGTTGGGAGATGA