Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Ap3s1
Plot displaying the genomic locations of a parental gene (in chr18) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name adaptor related protein complex 3 subunit sigma 1
Also known as -
Coordinate chr18:40732472-40798064
Strand +
Gene summary Predicted to be involved in anterograde synaptic vesicle transport and vesicle-mediated transport. Predicted to be located in membrane. Predicted to be part of AP-3 adaptor complex. Predicted to be active in intracellular membrane-bounded organelle. Orthologous to human AP3S1 (adaptor related protein complex 3 subunit sigma 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ap3s1

Retroname Coord Strand Genomic Region ENSG
Ap3s1P2 chr11:86849834-86850571 - Intergenic
 N/A UCSC
Ap3s1P1 chr11:47214813-47215151 - Intragenic
 N/A UCSC
Ap3s1P3 chr13:70203492-70204940 + Intergenic
 N/A UCSC
Ap3s1P4 chr17:7959946-7960250 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001106933.1
cgggtggggaagcAGCGGCAACAAGCTCCCGGAGGCGAGGCTCAcgcgcccgcccccgccctggccccagcgcccacccTGTCGGCCCGGCCCAGCCATGATCAAGGCCATCCTCATCTTCAACAACCACGGGAAGCCGCGGCTCTCCAAGTTCTACCAGCCCTATAGTGAAGATACGCAACAGCAAATCATCAGGGAGACTTTCCATCTGGTGTCTAAGCGAGACGAGAATGTTTGTAATTTCCTAGAAGGAGGATTATTAATTGGAGGATCTGACAACAAACTGATTTACAGACATTATGCAACACTATATTTTGTCTTCTGTGTGGATTCCTCAGAAAGTGAACTTGGCATTTTAGATCTAATTCAAGTATTTGTGGAAACATTAGACAAATGTTTTGAAAATGTCTGTGAGCTGGATTTAATATTCCATGTAGACAAGGTTCATAATATTCTTGCAGAAATGGTGATGGGGGGAATGGTATTGGAGACCAACATGAATGAGATTGTCACACAAATTGATGCACAAAATAAACTGGAGAAATCTGAGTCTCCCAGACAGGACAGGTAGACAAGGCTGGCTTAGCAGGAGCTCCAGCCCGTGCTGTATCAGCTGTAAAGAATATGAATCTTCCTGAGATCCCAAGAAATATTAACATTGGTGACATCAGTATAAAAGTGCCAAACCTGCCCTCTTTTAAATAAATATTAAAAAGGCCACTCCCAGGTAAAACCCAGAGGGAAAGTCATCTAAGTTTACCATGCAATTGTTTACCAAAAATAGAGGAGGAGAGTCTTAACTTTGCTCTTGGATTTAAGTCAAGGTACTGTATAGAAGCTGCATAAAATCAGTATGGAAGTTCAATGTTGCTTTTCTTGCTCAGTGATTTTAAAGAAATTGACTAGTTCCCATGTGATTTTTTTTTCTTTTCTAAATGCATTCCTATGCCCACATAAAGGCATGCCTCTATATATTGGCTATTACAGTATTTCGAAAAGTGAGATGTTTCTTTAATTATGTACAACCCAAGATGTTGATGTTTTGTATGGATCACAAGTGCAGCATTCTCTAATTCTTTCTGCTGTTTGTCACAGTTGTTATTTAAAGAACCAAGTATGTATTGCATGAAAACATGACTTTTTCTTTAGTTTAAATAAACTCCAAGGTAACTGGACTTCTAAAGTACCTTTCTGTTTTGCTTGGTATCTACTTTAGCAATAATTTTTTTTACAACCTTCTGACTCAACAAAGTAAATAAAAGTATATTTTACCACTGTTAAGCAA
>XM_006254694.3
gggggcgggtggggaagcAGCGGCAACAAGCTCCCGGAGGCGAGGCTCAcgcgcccgcccccgccctggccccagcgcccacccTGTCGGCCCGGCCCAGCCATGATCAAGGCCATCCTCATCTTCAACAACCACGGGAAGCCGCGGCTCTCCAAGTTCTACCAGCCCTATAGTGAAGATACGCAACAGCAAATCATCAGGGAGACTTTCCATCTGGTGTCTAAGCGAGACGAGAATGTTTGTAATTTCCTAGAAGGAGGATTATTAATTGGAGGATCTGACAACAAACTGATTTACAGACATTATGCAACACTATATTTTGTCTTCTGTGTGGATTCCTCAGAAAGTGAACTTGGCATTTTAGATCTAATTCAAGTATTTGTGGAAACATTAGACAAATGTTTTGAAAATGTCTGTGAGCTGGATTTAATATTCCATGTAGACAAGGTTCATAATATTCTTGCAGAAATGGTGATGGGGGGAATGGTATTGGAGACCAACATGAATGAGATTGTCACACAAATTGATGCACAAAATAAACTGGAGAAATCTGAGGCTGGCTTAGCAGGAGCTCCAGCCCGTGCTGTATCAGCTGTAAAGAATATGAATCTTCCTGAGATCCCAAGAAATATTAACATTGGTGACATCAGTATAAAAGTGCCAAACCTGCCCTCTTTTAAATAAATATTAAAAAGGCCACTCCCAGGTAAAACCCAGAGGGAAAGTCATCTAAGTTTACCATGCAATTGTTTACCAAAAATAGAGGAGGAGAGTCTTAACTTTGCTCTTGGATTTAAGTCAAGGTACTGTATAGAAGCTGCATAAAATCAGTATGGAAGTTCAATGTTGCTTTTCTTGCTCAGTGATTTTAAAGAAATTGACTAGTTCCCATGTGATTTTTTTTTCTTTTCTAAATGCATTCCTATGCCCACATAAAGGCATGCCTCTATATATTGGCTATTACAGTATTTCGAAAAGTGAGATGTTTCTTTAATTATGTACAACCCAAGATGTTGATGTTTTGTATGGATCACAAGTGCAGCATTCTCTAATTCTTTCTGCTGTTTGTCACAGTTGTTATTTAAAGAACCAAGTATGTATTGCATGAAAACATGACTTTTTCTTTAGTTTAAATAAACTCCAAGGTAACTGGACTTCTAAAGTACCTTTCTGTTTTGCTTGGTATCTACTTTAGCAATAATTTTTTTTACAACCTTCTGACTCAACAAAGTAAATAAAAGTATATTTTACCACTGTTAAGCAACTGTCAGTGTTGACTTTTTCAATTCATACTCATGTTTTTATTACTCAGAAGCTCACCAAGTCATTCAGAAACTGCTATGTCAAGATCGCCTGATGTCTCAGTGCGTTTACTTTGTATGATGAAACTTACAGTGGGAGATGGTGTGTCTTTTTTAGGAATGTTAAAGAAATGCTTTGTTTTTTCTATAAATTCCTTGCCTTAAACTTTGCCTCACATCCTTGCCCAGATGATAACAATGGTGTCAGCACATAGCTGTTTGTAAAGATTCCATGTGTGTTATAAAGTCATAGCTAAACTATTGAA