Summary

Gene Name	Smarce1
Specie	Rattus norvegicus
Full Name	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
Also known as	BAF57|RGD1304726
Coordinate	chr10:87116827-87138890
Strand	-
Gene summary	Enables protein N-terminus binding activity. Involved in brain development; negative regulation of transcription, DNA-templated; and spermatid development. Located in nucleus. Human ortholog(s) of this gene implicated in familial meningioma. Orthologous to human SMARCE1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Smarce1

Retroname	Coord	Strand	Genomic Region	ENSG
Smarce1P1	chr2:175425425-175425706	+	Intergenic	N/A	UCSC
Smarce1P8	chr17:67425587-67427030	+	Intergenic	N/A	UCSC
Smarce1P2	chr2:3673430-3674784	-	Intragenic	N/A	UCSC
Smarce1P3	chr2:70203289-70204645	+	Intergenic	N/A	UCSC
Smarce1P4	chr5:74535014-74536246	-	Intergenic	N/A	UCSC
Smarce1P5	chr6:92421232-92422335	-	Intergenic	N/A	UCSC
Smarce1P6	chr8:112162308-112163419	+	Intragenic	N/A	UCSC
Smarce1P7	chr17:45351281-45353626	+	Intergenic	N/A	UCSC
Smarce1P9	chr19:29800804-29802149	-	Intragenic	N/A	UCSC
Smarce1P10	chrX:97199168-97202391	-	Intergenic	N/A	UCSC

Expression

Transcript Sequences

>NM_001024993.1

CGAGCGCGGGACAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCCTTCTCGGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAAAATGTCAAAAAGACCATCTTATGCCCCACCTCCCACCCCAGCTCCTGCAACAGCGTCCTCCGGCATTACAATCCCAAAGCCTCCAAAGCCACCAGATAAGCCGCTCATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGAGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAGAAACAAGAATATTTAAACGAGTACGAAGCAGAAAAGATAGAGTACAATGAATCTATGAAGGCCTATCACAATTCCCCTGCATACCTTGCATATATTAATGCAAAAAGTCGTGCGGAAGCTGCATTAGAGGAAGAAAGTCGACAGAGACAGTCGCGCATGGAGAAAGGAGAGCCTTACATGAGCATTCAGCCTGCGGAGGACCCAGACGATTATGATGACGGCTTTTCAATGAAGCATACAGCCACTGCCCGTTTCCAGAGAAACCACCGCCTCATCAGTGAGATCCTCAGTGAGAGTGTGGTACCTGATGTGCGGTCGGTTGTCACAACAGCTAGAATGCAAGTCCTCAAGCGACAGGTCCAGTCTTTAATGGTTCATCAGCGGAAACTAGAAGCCGAGCTTCTTCAGATAGAGGAACGACACCAGGAAAAGAAGAGGAAATTCCTGGAAAGCACAGACTCCTTTAACAATGAGCTTAAAAGGCTGTGTGGTCTGAAGGTGGAAGTGGACATGGAGAAGATTGCAGCAGAGATCGCACAGGCGGAGGAGCAGGCCCGCAAAAGGCAGGAGGAGAGGGAGAAGGAGGCAGCCGAGCAAGCTGAGCGCAGCCAGGGCAGCATCGCCCCCGAGGAAGAGCAAGTGGCGAACAAAGCCGAGGAGAAGAAGGATGAGGAGAACATCCCGATGGAGACAGAGGAGACACACCTTGAAGACACTGCGGAGAACCAGCAGAATGGTGAAGAAGGCACATCTACTCCTGAGGACAAGGAGAGTGGGCAGGAGGGGGTTGACAGCATGGAGGTGGAAGGGACCAGTGACAGTAACACCGGCTCAGAGAGCAACAGCGCAACGGTGGAGGAGCCGCCCACGGACCCGCCAGAAGCCGAGAAGAAGGAATAAATGTGGCGTTGTTTTATGTGACCTAAAACTGTTTTTAAATGAAAAAAAAAATGTGTTGTTTTTGGTTTTAATGGTGTTATGTGGTCTGTGTATTATTTCCATTGATACCGTGAAGGTCTTCAATAGCATAGCCTAATGCCATCTGCTCACCTTTCTTAGCTCTCAACTTCTGAAACCTCAGAACTGAGATCAGTCGAGAGACCCATCTCTTTGAGAACCACTTGGATGCTGCAGAATCTGCTCTTCCAAATGCCTTCCTTCAGCTCACTTGGGTGCTCATCAAAGCCATAGCTTTAACCCCTCCCAGACCAACTACAGCTCTCCGAGTCCCCTGTCGTGTGTATTTATACAGAGTGCCCTCTTTATCTCTGATATCAGACACCAGGCATCCTCTTACAGGGTAGGGTGTAGCCTGAAACCAGCGAAACACAGATGAGACTGTGCAGAGATGGCCCTGGAGGGGCCGGGGGAGTAGTTACTGCTGTGGATTCTCATTAGGTGAGCCCTGCACGTGCATATCCATATCTGTGCAGTTATTATGGGATGTGTTCTGGGAAATTCATCCTTATTGTACAGGGGGAAAAGAAATGTGTTTTTACCAGATTGGTTTTCCAAAGACATGATAGACAGCAGAGCCTAAGGAATGGGATATTCTTATAATGGACTGCAGACTTCAAAGTGATTGGCCTATTGCAAAAGGAAAACAGGAACTACGTTCATCCACTTGAGCATACTTCATAGTGATGAAAACCTCAAGGCTCGAGATCCCATAGATCAGAGCCGAACCTACTTTTTTGATAAGCCCTTTAGTGGTGTTAGAGACTAGATATGAGATAGTTTGTAGTGCGTGCTCTCTGATATCTAGAATAGATTTTTACTGAATAGTGGTATATATGATGTTATATGTTTCTTAAAGGCCCAAACATAATAAAGAAATTAAGACAAA

>XM_017597317.1

GGCTACACACACACTTACTGAGCACCTAATTACAAGTCTAGCCCTTCGAAATCATTGGTAATTATGAAATTGTCCAGTCCAGATGCCTGAAATTTGGTTTTCAAGACTCTCCAAGATTGCAGATGGCCCAATCCCATCAAGAGGGTTTCAACAGGCCCTGGAAAAGTTCTAGGAGGGCATCACAAAGAAACATTGAGCTGACTATTTAAAGACAAGCGAGGGTGAGCTGAATTAGCCCTCCTGGTAAGAGATGTGAATTGTCACAGGTATGCAAGCTGGAAAGAGTGAGCTGACATATGAGGACCCTAGGCTCTGAAACCTGTCGCCATCATTCAACCTCTAGAAGCATCTGGAAAAACTACAAAACTCCCGTGTTGCTTTTCGCTTAGGTGGAGGCAGGGAGCCCTGCCGAGCGCCAGCAAGGACCAAAACGCGGGGATCCGGGtcctccccgcctacattctccatcctccatccacacgtccatcAGCGGAGTACAGAGGATCAGAGCGAAGGGGAACGCCAGGGTTTGGGGTGTGCGGGAGCTGCGACCCGCCCTCTCCCGGGAGAGGCTCCAGCGAGCCTTCCCCCAGCGCTTGCCTCACGCAGCGGAACCCACCGCCTCAGTGAAGCCGGGGTACGCAGTCTGCGCAGTTCCTGCCGCCGGGCCGCGAACCAGGGCCCGCAACGCGGCCCAACCTTCTCCGCCCTCCTCGCCGTGACGAATCGGCGCCCGGCTGGGACAGGATCCAAATTGAAAGACTTCTGAGGGATCCGAGGAGCCTGAAAAAAAAAATCTTTGGCGCACTAAACCTTGCCGCGTCTTCACTGGAAGGGCTGTTCGTCGGAGGAGGGCCGGCCGCAGCCCGCAGAAAATTCCCCGGAGCGTGTGGAAAGTGCGAGCGCGGAAGCTCCGGCGCGAGGGGCGGGGCGAGCGCGGGACAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCCTTCTCGGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAAAATGTCAAAAAGACCATCTTATGCCCCACCTCCCACCCCAGCTCCTGCAACACAAATGCCCAGCACACCAGGGTTTGTGGGATACAATCCATACAGTCATCTCGCCTACAACAACTACAGGCTGGGAGGGAACCCGGGCACCAACAGCCGGGTCACGGCGTCCTCCGGCATTACAATCCCAAAGCCTCCAAAGCCACCAGATAAGCCGCTCATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGAGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAGAAACAAGAATATTTAAACGAGTACGAAGCAGAAAAGATAGAGTACAATGAATCTATGAAGGCCTATCACAATTCCCCTGCATACCTTGCATATATTAATGCAAAAAGTCGTGCGGAAGCTGCATTAGAGGAAGAAAGTCGACAGAGACAGTCGCGCATGGAGAAAGGAGAGCCTTACATGAGCATTCAGCCTGCGGAGGACCCAGACGATTATGATGACGGCTTTTCAATGAAGCATACAGCCACTGCCCGTTTCCAGAGAAACCACCGCCTCATCAGTGAGATCCTCAGTGAGAGTGTGGTACCTGATGTGCGGTCGGTTGTCACAACAGCTAGAATGCAAGTCCTCAAGCGACAGGTCCAGTCTTTAATGGTTCATCAGCGGAAACTAGAAGCCGAGCTTCTTCAGATAGAGGAACGACACCAGGAAAAGAAGAGGAAATTCCTGGAAAGCACAGACTCCTTTAACAATGAGCTTAAAAGGCTGTGTGGTCTGAAGGTGGAAGTGGACATGGAGAAGATTGCAGCAGAGATCGCACAGGCGGAGGAGCAGGCCCGCAAAAGGCAGGAGGAGAGGGAGAAGGAGGCAGCCGAGCAAGCTGAGCGCAGCCAGGGCAGCATCGCCCCCGAGGAAGAGCAAGTGGCGAACAAAGCCGAGGAGAAGAAGGATGAGGAGAACATCCCGATGGAGACAGAGGAGACACACCTTGAAGACACTGCGGAGAACCAGCAGAATGGTGAAGAAGGCACATCTACTCCTGAGGACAAGGAGAGTGGGCAGGAGGGGGTTGACAGCATGGAGGTGGAAGGGACCAGTGACAGTAACACCGGCTCAGAGAGCAACAGCGCAACGGTGGAGGAGCCGCCCACGGACCCTGGCCAGAAGCCGAGAAGAAGGAATAAATGTGGCGTTGTTTTATGTGACCTAAAACTGTTTTTAAATGAAAAAAAAAATGTGTTGTTTTTGGTTTTAATGGTGTTATGTGGTCTGTGTATTATTTCCATTGATACCGTGAAGGTCTTCAATAGCATAGCCTAATGCCATCTGCTCACCTTTCTTAGCTCTCAACTTCTGAAACCTCAGAACTGAGATCAGTCGAGAGACCCATCTCTTTGAGAACCACTTGGATGCTGCAGAATCTGCTCTTCCAAATGCCTTCCTTCAGCTCACTTGGGTGCTCATCAAAGCCATAGCTTTAACCCCTCCCAGACCAACTACAGCTCTCCGAGTCCCCTGTCGTGTGTATTTATACAGAGTGCCCTCTTTATCTCTGATATCAGACACCAGGCATCCTCTTACAGGGTAGGGTGTAGCCTGAAACCAGCGAAACACAGATGAGACTGTGCA