Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Cbx2
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name chromobox 2
Also known as -
Coordinate chr10:108132105-108140935
Strand +
Gene summary Predicted to enable chromatin binding activity and methylated histone binding activity. Predicted to be involved in development of primary sexual characteristics and negative regulation of transcription by RNA polymerase II. Predicted to be located in euchromatin and nucleoplasm. Predicted to be part of PRC1 complex. Predicted to be active in heterochromatin. Human ortholog(s) of this gene implicated in 46,XY sex reversal 5. Orthologous to human CBX2 (chromobox 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cbx2

Retroname Coord Strand Genomic Region ENSG
Cbx2P1 chr11:3040768-3040903 - Intergenic
 N/A UCSC
Cbx2P2 chr11:3572896-3573031 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001107071.1
TGTGCAGCAGTAAGCCGGGGTCTGCGGGGCGCGGGCCGCGGCGGGCGGCGGCATGGAGGAGCTGAGCAGCGTGGGCGAGCAGGTCTTCGCCGCCGAGTGCATCCTGAGCAAGAGGCTCCGCAAGGGCAAGCTGGAGTACCTGGTCAAGTGGCGCGGCTGGTCCTCCAAACACAACAGCTGGGAGCCCGAAGAGAACATCTTGGACCCGAGGCTGCTCCTGGCCTTCCAGAAGAAGGAACATGAGAAGGAGGTGCAGAACCGGAAAAGAGGCAAGAGGCCCAGGGGCAGGCCAAGGAAGCACACAGTCATGTCCTCCTGCAGCCGGCGCTCCAAGCTCAAGGAACCAGATGCACCGTCCAAGTCCAAATCCAGCAGTtcatcctcttcctccacatcttcctcctcttcctcagatgaagaagaagaagacgacgacgaCAGTGACCTGGACTCCAAGAGGGGATCCCGGGGCCGTGAAACCCACCCGGTCCCTCAGAAAAAAGCCCAGATCCTGGTAGCCAAGCCAGAGCTGAAGGATCCCATCCGAAAGAAGCGCGGACGCAAGCCTCTACCCCCGGAACAGAAGGCAGCTCGGAGACCGGTAAGCCTGGCCAAGGTGCTAAAGACCACCAGGAAGGACCTGGTGACCTCAGCCCCCAAGCTGCCCCCTCCACTCAGTGCTCCTGTGGCAGGCCTGGCTGCCTTGAAAGCCCACACCAAAGAGGCCTGTGGCGGCCCCAGCACTATGGCAACCCCAGAGAACCTGGCCAGTCTGATGAAAGGCATGGCCGGGAGCCCCAGCCGAGGCGGCATCAGCTGGCAGAGTTCTATCGTACACTACATGAACCGCATGAGCCAGAGTCAGGCTCAGGCCGCCAGCCGGCTGGCGCTCAAGGCCCAGGCTGCCAACAAGTGCAGCCTCGGGCCGGACCTGAAAGTGCGGACGCAGAAAGGGGAGCTAGGGGTGAACCCCGCAGGAAGCAAGGTTCCCAAGGCCCCTGGCAGTGTTGCTGCAGAGCAGCAGAGAGGGAATAATTCGGGGAGTCCAGGTTCCCAGCTGCCACCCACTCAGGAGTTGAGCCTTCAGGTCCTTGACTTACAGAGCGTCAAGAACGGTGTGCCCGGTGTGGGCCTGCCTGCTCGCCATGCCACAGCCACCAAGGCTATTCCTGCCACCAACACAGCCACGGGGAAAGGTCCTGGGAGCGGCCCCACAGGAGTAAACGTGACCAACGCTCCCACAGACACCAGCAAAGGGGAAAAACTGACTTGCAAGACAGCGGCTCTGCCTGCCCCTTCTGTCAAGAGGGACGCCGCTAAAAGCATTGCTGCCTCTGGTGGGCAGGAGGGCCACACAGTCCCCGGAGAAGGTCAGAAGCCACCTGCACTGTGTGAACTGAGCACAGGAGAGGAGAACAGCAGTTCTGACTCAGACCCCGACTCATCCTCGCTGCCTAGTGCTGGGCAGAACCTGTCGGTAGCTGTCCAGACCAGCCAGGACTGGAAACCTACCCGAAGTCTCATCGAGCACGTCTTCGTCACGGATGTCACAGCCAACCTCATCACTGTCACCGTGAAGGAGTCCCCCACCAGTGTGGGCTTCTTCAACTTGAAGCATTATTGAGCCCATTGCCCAAGTCAGACCTGCCTTCCAGTCTCTGGTTTTGCTTTGATGCTTGACCGGGGGGGGGGGGGGGGCAGCTCTGCCTTGTCCTGAGACTCTGGGCTGGGAAATGGCTTCCTGCTGATTCTACCTCTCTGGGCCTCCACTTCAGTCTGTCCTGTCACCTCAGGAAAGCCGGGTGGCCACTGACTTGAAAGCAGGCTGCTTGGAAAAGGCATTTTTTTCTAGAGTCCCTCCCTGACCTAGTGAGACCCTCCCCATCGCTGCCCAACTACCAGGAGGTGGGTAAGGGGAGGGGCTGCTGATAGAGCTCCCTCCCCAGGCCAGCGAGGAGACGGGTGGGGCTGGCAGGACCTTCTCTCAAGTCCACCCATGGCAGAGCCTTTCTGGTGAGGGAGAGGCACTCTGTGCTTTGCAAGTAAGGCTATATTGCTTCATTTCTTAAAAGGATAACTAGTTGTGAAGTTGGGCTCAGGGACCCCGCAGAACTCTTGAGTCTCTCTATCCCTGGTTTGGCGTCCTCTCTAGCTGTGACTGTAGTCCCAGAGCCCAGCCAGGGTTTGGAGTTCCAGCACGAAGATGTACCTGGGTGTTACTGGACTTGGGAACAGAGGGAATCGTGTTGTTACCACCTCCTTCCTGCAGGCAGGCCTGAGCTTCAGTGAGAAGTGACCCTGTTCCCAGGCCCCTGCTTTGGCCCACTAAGTTGTACCCTAGTTCTGAGGTCTGACACTCCTGGGCTTGGGGGAGGAGTGGGGCTAGAAACCCAGAGCAGGCTAAAGTAGAAGCCAGGAGTCCTGGGTGAGCAATTTTCCCCACAGAGTTTTTTTTTTTTTTTACAAGGGTCCCCTAAGTCGCCACGGTAGCTCCAGTGTGGGAATAAAGGTGTTTCATGGGGGCCTGTCTAGACTGGACATCTCTAGACTGCTGCGTAAGCATTTCCTGTAGTCAATCCTGGTGCAGAGATCCCTACCTGGTGAGTGAGCCACTCTTGGGTCCCGTTTTCCCTGACAATCCTCTCCCGCGTTTGGGAGCTTGTGTTTCCTTCCTCCCTGAGAAGCAATATCCCTATGCCTTTTGTGTGGTGGGGTAGTTGGGAGCCTACCTGGCAGAGGGCCCTAATTCCTTCCCTCTCTTTAGGAGACGAGCTAGTTCTGAGCTCCTTACCAGATGCCTTCTCCCCTGTCCCCCATCCCAGGTAGCCGTCATGAAACTACCTTGTCATATTGCTGGCCGATGTCAGGATTGTCTGTCCTGGAATATCGCTGTGGGCCATGACAATCCGGTCAGTGAGTCTGTAATGCCAAAAAGTGGGGGTGGTGTGAAACCCTTGTTTCTACTTCTGCCATTGACTGATCAGCCAGCGGGTATGGGCTCTCACTCCAGTGGCCTTGAAGGGAAGTCTTTCCCCTTCTAAAACCAGCCAGACAGGGGGCTGAGGTGTCCGGGACCTGCCGTGCTTTCAGAGTGCATCCCACCCCTGCCCCCAGTAGCTCACTCTGCACACCAAATAAGACAGACGGTCTTTGTGTAACCAAACCAACCTCAGCACTGTGCCTTTTGGGGACAGACCCACATCCATGGCTCCTGAGAGGTGCCTGTGATGTGCCAGGGGGCCATGTCACTGGCAGCTGGAGCTACCGGTGGGAATTCAGGACCAAGAAGTGGGTAGCAAGGAGCAAAGAGTTACCTACTGGGCCATCGGCTTCCTTCCCTGCCCCCAGCCAGGGTCCTTTGCTGCCTTACCCAAGGTCTGCAGCTTCTGTGTCAGACACTGCCTTACAGGCACCTCCATGTCTTTTGGGGGTCCCATGAGCTATTGGAGAAGTGATGGTGTTTGGGGATCTGGGTTGACTGGCCTTTGTCCCCTGCTGCCAGTCTCCAAAAACCCTGATTTGGTGCCTTTTTAATTTTACTGGTTATGTAAGTCCCAAAGTTGAAATCTACAAATCCTTTCCTCTCAGCCACTTTGCCTTCTCGTGTTTTTCTTTCCTGGTGCTGTGACCTCAGCGGTCTGTTACAAAGCATACGTGTGTAGTGTGCCGGCGTGAGAGCCCCACTGGAGCGGCACCATACGCTCCGAGTCAAGTTCTCGTGTTTACCAATAAATAAAGTAGTTGGTTTTT