Summary

Gene Name	Hmgb3
Specie	Rattus norvegicus
Full Name	high mobility group box 3
Also known as	RGD1564407
Coordinate	chr17:36690190-36694329
Strand	+
Gene summary	Predicted to enable DNA binding activity, bending; RNA binding activity; and four-way junction DNA binding activity. Predicted to be involved in DNA geometric change and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within negative regulation of B cell differentiation and negative regulation of myeloid cell differentiation. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in syndromic microphthalmia 13. Orthologous to human HMGB3 (high mobility group box 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Hmgb3

Retroname	Coord	Strand	Genomic Region	ENSG
Hmgb3P1	chr4:25011242-25012714	+	Intergenic	N/A	UCSC
Hmgb3P2	chr6:14098692-14100103	+	Intragenic	N/A	UCSC
Hmgb3P3	chr6:43570209-43571695	-	Intergenic	N/A	UCSC
Hmgb3P4	chr6:44193585-44195071	-	Intergenic	N/A	UCSC
Hmgb3P5	chr6:76449862-76451511	+	Intragenic	N/A	UCSC
Hmgb3P6	chr7:27829528-27829736	-	Intergenic	N/A	UCSC
Hmgb3P7	chr8:56819721-56821094	-	Intergenic	N/A	UCSC
Hmgb3P8	chr10:101130003-101131464	+	Intergenic	N/A	UCSC
Hmgb3P9	chr13:24496289-24497497	-	Intergenic	N/A	UCSC
Hmgb3P10	chr14:51170864-51172381	-	Intergenic	N/A	UCSC

Expression

Transcript Sequences

>NM_001173341.1

TCGTGCAGGCAGCTAGCGCGAGGCTGCGTCGCGCCCCGCGCTGCCCAGACCGGCGAACAATACAGTCAGGATGGCTAAAGGTGATCCCAAGAAACCAAAGGGCAAGATGTCCGCCTATGCCTTCTTCGTGCAGACGTGCAGGGAAGAACACAAGAAGAAAAACCCAGAGGTTCCAGTCAACTTTGCTGAGTTTTCCAAGAAGTGCTCTGAGAGGTGGAAGACGATGTCTAGCAAAGAGAAATCAAAGTTTGACGAAATGGCCAAGGCGGATAAGGTACGCTACGATCGTGAAATGAAAGATTATGGGCCAGCTAAAGGAGGCAAAAAGAAGAAGGACCCGAATGCCCCCAAAAGACCTCCGTCTGGATTTTTCTTGTTCTGCTCTGAATTCCGCCCGAAGATCAAATCTGCAAACCCTGGCATCTCTATTGGAGATGTGGCCAAAAAGCTGGGTGAGATGTGGAATAACTTAAGTGACAGTGAAAAGCAGCCTTACATGACCAAGGCAGCAAAGCTGAAGGAGAAGTATGAGAAGGATGTTGCTGACTATAAGTCTAAAGGGAAGTTTGATGGTGCCAAGGGTCCTGCTAAAGTTGCCCGGAAAAaggtggaagaagaggaggaggaggaggaagaagaagaggaggaggaggaagaggaagaagatgaATAAAAACTCTGTCTCCTTGTGAATACCTTAGAGTAGGAGAGCGCTGTGATTGACACATCTCTTATTTGAGTCGTGTCTATTGCCCTTGTTAGGTTTAATTACAAAATTTGATCACGATCATATTGTAGTTTCTCAAAGTGTCAGTGGTTTACATGAAGTGGCCGTGGGTGTCCGGAGCGCCCTGAAACTGTATCAAAGTTGTACATAGCTCCAAACATTTTTAAAAAGAAAAGGCACTCTCTCGTCCTCCTCACTTCAGTGCACTTTGCTGTTGGGGTGACAAGGCATTCGAAGATTTTTTTCTGGCATTTTGTTCTCAACTCGTAAGGTAGTGTTAACTCTATGGCTATTGGCTAGAAATCCTGAGTTATCAGCTGTACATATCTATAGTTTGTAAAGAGAACAAAACAGCCCAGACAGATTCTTGATGCTCCTTGTTTGGCGTGGACGTTGTGAGGGGAGATGCCTTTCAGAGGGGGCCGTAGCTCAGGGCGTGCACTGTGAGGCTGGACCTGTTGATACTGCGGTGGGCATCCATTTAGCTTCAGGTAGTCTTGTTTTTGTACATAGTGGCATAGCATTCTGCTGACATTCTTAGTTGTGGAGGCGGGGGGAGGGGTCAGCTGGCATGAGAAGTGTTTGGAGTTTTTCCTTTAGTTAAGTGCAGTAGATTTTAAACTTTTTAAAGCAACTGTAGAACTCATCGTTGTCAGCAAAGTGAAGAACTACTGCATCAATGGAAGGTCAAGAACCCTCTGTACCTAAACCCAATTTGCAACATTCTGTTATTTTTTGTATGTTTAGAATGCTGAAATGTTTTTGAAGTTAAATAAACAGTATTACATTTTTAAA