Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Sf3a1
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name splicing factor 3A subunit 1
Also known as -
Coordinate chr14:84393182-84413931
Strand +
Gene summary Predicted to enable RNA binding activity. Predicted to be involved in U2-type prespliceosome assembly. Predicted to be located in nuclear speck. Predicted to be part of U2 snRNP and spliceosomal complex. Orthologous to human SF3A1 (splicing factor 3a subunit 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Sf3a1

Retroname Coord Strand Genomic Region ENSG
Sf3a1P1 chr1:151330136-151331612 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001107235.1
GTGCCTCCGCGGCTTTTCTCTGGGTCGTCGCCATCTTGCCATTGAGTTGGAGACTTCGTGTGGTGAGCTTAACCTTGTCGCCGTACCGGTTGTCCACACCGAGGCGGACTGGCAGCCCTGAGCGTCGCAGTCATGCAGGCCGGACCCGTGCAGGCGGTACCCCCGCCGCCGCCAGTAGTCACTGAGCCCAAACAGCCAAATGAAGAAGAAGCATCATCAAAGGAGGATTCCACCCCTTCCAAGCCAGTGGTGGGGATTATTTACCCTCCTCCAGAGGTCAGGAATATCGTCGACAAGACCGCCAGTTTTGTGGCCAGAAATGGGCCTGAGTTTGAAGCTAGGATTCGACAGAATGAGATCAACAACCCCAAGTTCAATTTCTTAAATCCCAATGACCCTTACCATGCCTACTACCGCCACAAGGTCAGCGAGTTCAAGGAGGGGAAGGCTCAGGAACCCTCAGCTGCCATCCCCAAGGTTATgcagcagcagcagcaagccacacaacaacagctgccccagaagGTCCAAGCCCAGGTGATCCAAGAGACCATAGTACCGAAGGAGCCCCCTCCTGAGTTCGAGTTCATCGCTGACCCCCCCTCCATCTCAGCCTTCGACCTGGATGTAGTGAAGCTGACAGCTCAGTTTGTGGCCAGGAATGGGCGTCAGTTTCTGACCCAGCTGATGCAGAAAGAACAGCGCAACTACCAGTTTGACTTTCTCCGACCCCAGCACAGCCTCTTCAATTACTTCACAAAGCTGGTGGAGCAGTATACCAAGATCTTGATTCCACCCAAAGGCTTATTTGCAAAGCTCAAGAAAGAGGCTGAAAATCCCCGAGAAGTTTTGGACCAGGTTTGTTACCGAGTAGAATGGGCCAAATTTCAGGAACGTGagaggaagaaggaggaagaagaaaaagagaaggagCGAGTAGCCTATGCTCAGATCGACTGGCATGACTTTGTGGTAGTGGAGACAGTGGATTTTCAACCCAATGAGCAAGGGAACTTTCCACCCCCAACAACACCGGAGGAACTGGGAGCTCGGATCCTCATTCAGGAACGCTACGAGAAGTTTGGGGAAAGTGAGGAGGTGGAGATGGAGGTTGAGTCTGATGAGGAAGATCAAGAAAAGACTGAGGAGACTCCTTCCCAGCTGGACCAGGATACTCAAGTACAGGACATGGATGAGGGTTCAGACGATGAAGAAGAAGGACAGAAAGTGCCTCCACCCCCAGAGACACCCATGCCTCCACCTCTGCCCCCAACACCAGACCAAGTCATTGTGCGAAAGGACTATGATCCCAAAGCTTCCAAGCCCCTTCCTCCAGCTCCTGCTCCTGATGAGTATCTTGTGTCCCCCATAACTGGGGAGAAGATTCCTGCCAGCAAAATGCAAGAACACATGCGCATCGGGCTTCTTGACCCCCGCTGGCTGGAGCAACGGGATCGCTCCATCCGAGAGAAGCAGAGCGATGATGAGGTGTACGCACCAGGTCTGGATATTGAGAGCAGCCTAAAGCAGTTGGCTGAGCGACGTACTGACATCTTTGGGGTAGAAGAGACAGCCATTGGTAAGAAGATTGGTGAAGAGGAGATCCAGAAGCCAGAGGAAAAGGTGACTTGGGATGGCCATTCAGGCAGCATGGCCCGGACCCAGCAGGCTGCCCAGGCCAACATCACCCTCCAGGAGCAGATTGAGGCCATCCATAAGGCCAAGGGCCTGGTGCCAGAAGATGACACCAAAGAGAAGATTGGCCCTAGCAAGCCCAATGAAATCCCTCAGCAGCCACCGCCTCCATCTTCAGCCACCAATATCCCCAGCTCAGCGCCCCCCATCACGTCAGTTCCCCGGCCACCTGCGATGCCACCTCCAGTCCGCACCACTGTCGTATCTGCAGTGCCTGTCATGCCTCGGCCCCCCATGGCATCTGTGGTCCGGCTGCCCCCAGGCTCAGTGATTGCCCCGATGCCACCCATCATCCACGCACCTAGGATCAACGTGGTACCCATGCCTCCTGCAGCACCTCCCATCATGGCACCCCGCCCACCTCCCATGATTGTGCCAACAGCCTTTGTGCCTGCTCCCCCTGTGGCTCCAGTGCCAGCCCCAGCTCCAATGCCTCCCGTACACCCCCCACCTCCTATGGAAGATGAGCCTCCATCCAAGAAACTAAAGACCGAGGACAGCCTCATGCCTGAGGAAGAGTTCCTGCGCAGGAACAAGGGTCCAGTATCCATCAAGGTGCAGGTACCCAACATGCAGGATAAGACAGAATGGAAGCTGAATGGGCAGGGGCTGGTCTTCACTCTCCCGCTCACAGACCAGGTCTCTGTCATCAAAGTGAAGATTCATGAAGCCACGGGCATGCCTGCAGGGAAGCAGAAACTACAGTATGAAGGCATCTTCATCAAGGACTCCAACTCCCTGGCTTACTACAACATGGCCAGTGGTGCTGTCATCCACTTGGCCCTCAAGGAAAGAGGCGGCCGGAAGAAGTAGCCTCGAGAGATACTGCAAGTGGACTCCTGCCATTGTACCTCTTTCCACCACCAATTCCGGGAGTTTCCCTGGGACCTCGGGCACAGCCTGGGCATTTGTCTCCCTCTAAGGCAGTCTATGGAATGGATATCTGTTTAGATTTGGATTGGAGGTCCTTCAAGGAAGCCCATTAGGAATTGAAAACCCAGGGTTCTCCCACAGGAGAGCTTCATAATACCAAGTAATGTTTGGCTAATAGAGTATGGTTACTACCATTCATCATTGTGTATCATGCTTTGGCCTCTAATAAacctcttgaagccaggcatggtacacacatgcctgtaatcccgggacttggggggcgggcagaagaattaaatgttcatcttggctgtacagtttgaggccagcctgcgctgtgtgagatactgtgttaattttttttttttttttttttttttttAATTAAAAAGTAAGCCCTCACCGAAGCAGTTTGTCCTGCCGTACACAGACTGGCTTAGAAAGCGCTGCCATTCTTACCTAGGCTGGGGATAGTGGAGAATCTCCTGGGGACAAAGAGAATTTCCTAATTGATTAAGAGGGAAACATGGTCTGTCCTTGACACAGCTGTGCCATTGCACAGTGCTGTTGCGCTCTGGGTCTCTGCAGTCCTGGTGTTACATATACATTTTTGCTGTCATCGTGTCTTTTAAGTATTTCTTCTAAAAAGCATTATGGGCTGGGGAGGGGGCTTGGTGAGTAAAGTGCTCATGGTGTAAGAATTGATGTAAAAGCCACTAGAACAAGCCACTGCTCCCTCTGTGCTCTAGGAGACAGAAGACTGAGCCAGAGTCATCCTATGCAGGCCAGTGCACAAGAAAGACCTTCCGTGAAGCCAGGTGGCAGCAAGGGCAAACGCCCATGGCTGTCTTCTGATCGTTCATGTGTTTGCCACAGTGTGGCTTTATAGAGATAGTTAAAGCTTTGGTGTTCTCCAGCACGCAGTAGTCATAGAGCAAGGACCAGTAGCTTTTCTCATGCCTGAGATTACCCATCACCTGATGGGCATAGTAGTTTTTAGTTTGCTCCAGAGTGAGCAAAGGCTGTTCTTTACGTGTGTGGTTAATCATGCCTCGTGCTGACCTGAGGGCCTCACATCTAGTTCACTACTTCTATATTGTGCTTGGTTTTGTTTTTGCCCCCCCCCCCCACCCCTCCTttttctttggttttgaaatagctcccctggaacttgctatgtagactaggctggttttgaacacacagaggtcagcctgcttttgcctcccaagtgctagaattaaaggcatgggccatcaggcttgacACTGCTTCCTGTTCAAGTGCTTGTGTAGTCCTTGTGATTATTCTTATTTGAGACACGGAGGGCAAGTCACATGCCCACAATCCCATGGTTCAAGGATGAAGAGTAAGTCCAAAACCTTACTCTTGGTCTCCAACCGCGGTCCTGATGTAGGCCATTATTTTTGGAACTGTGCTCTTGCAGAAGCATAGGTGCTGCTGTGTGTTCAGGAGGAGTGGGGAGAGGTGAGACCGTGTTAATGAGCTGTAAACAAAGCTGATTTCTTTTTAGAGGATTACACAAGCTGAAAGCTTTTAAGGGTTCCCAGGACCTTTTCTTTTGTGGTCTCTCAGGAAAAGAACACTCAGGATCACAGAAGCAATATTCTATTCCTCAACCTACTCCACCTTTTCCTCGAAGCCTAGGCTTAGGCAGCTCCTTATAGCACCCGGGCCTCACATTTAGCATCATTGATGTCATCGTACTCTGTAACCTGTGTGACATCGACCTCTCACCTGGTTGCTAGAAGTTTGCCTAGGGACTAGTGCAAAATTGGTTTGTTGGTGTTCTTTTCTGATTTAGGGGCCTGGAACAAGCTCACTGCTAGACACTAATTGGGCAGCACCAGAAATTCCCTGGAGGCATTTCCAGGAGGAGGGTGTGCTGTGTGTGGGAGGGGCATGAGGAAGGCTCAGAGAATCCCTGGCCCAAGAGCTCCTTTTTGGTATTAGGGACATGGCATTGTGTCAGGGCATATGCCTCTGCAGACTGGCAAACCCCACAGTGCCTCTGTGGCTGAGGCTATGACTTGAGACTAGGAATGTGGCTGGGTAGAATGCAAGTGAATGGGCCCTTTGATCCACACTCCGGAGTTCACAGTTCCCAGAATTCCTGAATGAATGCCTGCTCTGCCTCACTTTGACTTGGAGGCTCATTGACCACAGAGCCTTGTGACCTTTGGTGGCCACAGACCAAGATTGTTTTCTAGCACGGCATATCCTACAGCCTTGTAAGTTTGAACAGTGCTTATCCAAACTTAAGTTTTAAAATGTTTGTAAAAATAAGCTGTTTtattaaaaatatatgtatatatgtattatatataAGCTACTTTGGTCATATGCCCTCCATTATCCTCGTCTTTTTCTCCCTGAAAACACTTCTTTCCAACAAGCTTCCTCAAGCTTGTTTCTGTGTGGTCTGTG