Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Wdpcp
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name WD repeat containing planar cell polarity effector
Also known as RGD1309501
Coordinate chr14:106393959-106759511
Strand +
Gene summary Predicted to be involved in several processes, including cilium assembly; regulation of embryonic cell shape; and septin cytoskeleton organization. Predicted to act upstream of or within several processes, including embryonic digit morphogenesis; glomerular visceral epithelial cell migration; and sensory organ development. Predicted to be located in axoneme. Predicted to be active in axonemal basal plate. Predicted to colocalize with apical plasma membrane and cell cortex. Human ortholog(s) of this gene implicated in Bardet-Biedl syndrome 15 and congenital heart defects, hamartomas of tongue, and polysyndactyly. Orthologous to human WDPCP (WD repeat containing planar cell polarity effector). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Wdpcp

Retroname Coord Strand Genomic Region ENSG
WdpcpP1 chr1:152034907-152035301 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001127537.1
GACAGCACCCGCCACTCCACCGAGAATCTATCCTCCCCCAAGACTAAACAAGGGAGGCAAAGAGACCTTCCGTTGCAAAAAAAAAAAAGCCAGCTCGACCCGGAAACAAAACCTTTTAAAAACGCACTCTCTCAGAGGCGGGAGGAATTGACGCTTGCGGAGGAACCGGCAGCTTCACCGTTGCTAGGCGACAGGGAAGGCTCACCTGAACGCTCTCGGAACCGAGACAGAGTGGAGCTGCGTCCCCACGCCTGAAGCAGGACAGAGATTTCCTCCGCTGTCAGATGTCTTTCTGCTTGACTGAACTGCACCTGTGGTCTCTGAAAAGCACCTTACACATTGCGGATAGAGACATCGGCGTCTACCAGTACTATGACAAGAAAGATCTACCAGTATCAGCAGCAGAGCATGGTAACTTAGAAGAAAAACAAAGGCTGGCAGAATCACGAGATTATCCTTGGACACTCAAAAATAGACGCCCAGAAAAACTTCGAGATTCACTGAAAGAGTTGGAGGAACTGATGCAGAACAGTCAGTGTGTGCTGTGCCAATGGAAGAGCAAACACATCTGTCAGCTCCTCTTTGGTTCAGGTGTGCTGGTGTCCCTAAGCCTTTCTGGGCCTCAGCTGGAGAAAGTGGTGATTGACAGGAGCCTGGTGGGGAAGCTCATCTCAGACACCATCAGTGATGCTCTCCTTACAGACAGTTTCATCATCTTATCATTTCTGGCACAAAACAAATTATGTTTTATTCAATTTGCAAAGAAGATGGATTCTCTTGATGTAAACAAGAGGTTGGAAAAGCTCTCAGCCTTGGATTATAAGATTTCCTACCATGACATACCTGGCCCAGCCACCAGGACAGTAGATCGTCACTTAGCCATCAACTCCACTCAGGATCTAGCTGTTTGCTGGTGGCCTCTGCTCAGCGATGATGCTTGGCCTTGGACTCCGATCGCTTCTGAGAAGGACAGAGCCAATATGCTGCTCCTGGGCTTTACTCAAGGAGGATTGGAGGTCCTGAGCTCTGTTCGCACAGAATGGAATCCTCTGGATGTTCACTTTGGCACCAGACAACCTTATCAGGTGTTCACAGTGGAGTGCTCCTTCAGTGTAGACCAGGAGCCCATGGCTGACAGCTGTATCTACGAGTCTGTCCGGAACAAACTCCATTGCGTGTCAGTTACTAGAATACCACTAAGGTCGAAGGCCATCAGCTGCTGTAAGAATTCTACGGAAGACAAACTGATTGTGGGCTGTGAAGACTCGTCCGTAATTCTCTATGAAGCTCACCGTGGAGTGACTCTCTTGGCCCAGGCTGAACTTATGCCTTCATTAATAAGCTGCCACCCAAGTGGTGCCATTCTGCTGGTTGGCAGCAACCAAGGGGAATTACAAGTTTTTGACATTGCTCTGTCCCCTATCAACATCCAGCTCTTGGCAGAAGATTGCTTACCAAAGGAGACTCTGCAATTCAATAAATTCTTTGATTTTTCCAGCAGTCTTGTTCATATGCAGTGGATAGCTCCTCCCATTGTTTTCCAGAAGCCTAAGAGAGGAGAAATCTGTGATCTCCTCTTCCTCAGGTTCAACAGAGGACCTTTGGGTGTGCTGTTGTTTAAACTTGGTGTCCTCAGGCGAGGGCAGCTGGGCCTGGTGGACCTTATCTTCCAGTACATTCACTGTGATGAGGTGTACGAGGCCGTCAGCGTTCTGAGCAGCATGAACTGGGACACCCTGGGGCAGCAGTGCTTCATCAGCATGAGCACCATTGTGAACCATCTTCTCAGACAGAGGCTCACTCCGGAGAGGGAAGCACAGCTTGAGGCAAGCCTTGGAACCTTCTATGCTCCAGCGAGACCGCTTCTGGATACAACTGTTCTGGCATACAGAGACCCGGTTGGCACGTACGCCAGGAGGCTCTTCCACCACTTGCTCAGGTACCAGAGATTTGAAAAGGCCTTTCTTCTAGCGGTTGACATTGGAGCTCGTGACCTGTTCATGGATATTCATTACCTTGCCCTGGATATGGGTGAGCTACTGGCTGAAGTGGCAAGAAGAAGGGCAGATGACATTGATGTCGAGTCAGTGTGCTCTGGAGTCGAACTCCTGGGACCCTTGGACAGAAGAGACATGCTGAATGAAGGTTTTGCCGGCTCAGCTTTAACACCTGAAGGAGGAAACCCATTTCCAGACCTTCTTCCTTCCAGTGGTTCAACACCCAAGCATACTATTCAACAGAAAATACCAAATGGCCCTTCAAACAGACGGGCAATTGAAAGAAAGAATgaggtgatggaggagacagaggaggaagaggaggaggaggaggaggCAGCGGCCTGCACTGACTCTTCAGTGGCTACCACCTGGGATGCAGAAGGAGAACTGAGGGAAGACCACAGGAGACAGGACACTGAAGATGTTGGTTCTCTCAGAATGGTTCACTTTGGTTTGGTGTAATGATTAGAAACACCAAAAAGAAAGCTGTCCTTTTTATATCTTTTCTATTGACCTTATCAACAAAAGTCTTCACGCATGGACTGTAGTAGAAGGAAAGCTAGTGCATGCAGCACAGCGTAACATAGCTAAGCAGCCCTCAGTAAAAGTTCCTAAACAA