Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Cln5
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name CLN5, intracellular trafficking protein
Also known as -
Coordinate chr15:93634815-93644146
Strand +
Gene summary Predicted to enable mannose binding activity. Predicted to be involved in several processes, including lysosomal lumen acidification; nervous system development; and signal peptide processing. Predicted to act upstream of or within lysosome organization and visual perception. Predicted to be located in several cellular components, including Golgi apparatus; perinuclear region of cytoplasm; and vacuole. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in neuronal ceroid lipofuscinosis 5. Orthologous to human CLN5 (CLN5 intracellular trafficking protein). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cln5

Retroname Coord Strand Genomic Region ENSG
Cln5P1 chr2:66607818-66608325 - Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001191689.1
ATGCCgcgcgtggggccaggcggagcgcactggcgcccggcgctcgcgctggcgctgctggggctggcgGCCACTCTGGGCGCGTCCCCGACGTCTGGGCAACGCTGGCCCGTACCCTACAAGCGCTTCTCCTTCCGTCCGAAGACAGATCCCTTCTGTCAAGCCAAGTATACTTTCTGCCCTACTGGCTCACCCATCCCAGTTATGAAGGACAATGACGTCATCGAAGTCTTAAGGCTACAAGCCCCTGTTTGGGAATTTAAATATGGAGACCTCCTGGGACACTTCAAAATCATGCACGATGCCATTGGATTCAGGAGTACGCTGACGGGCAAGAACTACACAGTTGAATGGTATGAGCTTTTCCAGCTCGGCAACTGTACATTTCCCCACCTTCGGCCCGAAGTGAACGCTCCGTTCTGGTGTAACCAGGGGGCAGCCTGCTTCTTTGAAGGAATTTACGATAAACACTGGAAGGAAAACGGGACGTTGTCGCTGGTTGCAACCGTATCCGGTAAGTTCAAAAGCAACGAATTGATAACAacatttccagaatggttgtaccagtttCCCTCTGCTGCTGCTACTCTCCATCCACCAGCATCCATATTCTCCCGGGGCTGTGCCTACACTGGTGTCTTTGGTCACCTTCACCTCCTGGGGCGCCTTGTCGGAAGTACAGTATATGTCAAGACTCCCGGAAAGAAGCAGAAACCTTAATTGTATTGGCCAAAGTGAATGGGTTGCAATTACTCGATCTCAGCCATGGAGATTCTTTGATCCCAAGGTTAACATGTTTTCTCGGGCCACCTTTTCTGTTACAGTAGTGATATTTCTTAGTTTGGGTTACTTTTTTGTTTGTTTGGGTTTTTTTGTCTCTAAAGAATAGTTGTTTTTATAGTTATTACAGCCCTGGGGGTCCAGGTGAACTGCTTTCTAGTCACATAACCTTAAAGCCTCGTTTGGACGCCATTACTGGAGCCTGTCTAATGCCCCCTAATAGCATTCCTCTAGACATGGCAAAGACAGTAGAGCTGTTGTGACAGGGGCCACCTAACATCTCTAGATGTATGTCCTTGCCTCTAAAATGACTCACCTACCAGGTACATGAAGATTGGGGGCACCTATGTAGGCATGGGGGGACATACTGAGTGCATATATGGCCTCTCTTGGGACCAAAAGCACCCCGACAGACTACACATGGCTTCAGTTCTTCAGTACAAGCCGTGGACGTGTCTGCCTCCAGACACAGCTAGGTGAAGTGTTCTGACTTCCCGTGTGTGTCCTCTGGTTTTTCTCCCGCCATCATCACAGAGAGTACACCCTTCTGCAAAGGGTGGAATTTCGTCAGGGACCCTTGTCAGCTCACTACGCTGCCGTTAGAGGCATTAGACAGGCTCTCGGGGCCTGTATTTTGATCAGTTGAACTCCGGTTGGTTCGGTTTGTTTCCCTATTTAACACTAGCACAATAATCAAAGTCTTTAAATATAGACATTATTGtattattattattattattattattattattaGACATATTATTAGGTGCCAGTTTTTAATTGCCGCCTAACAGCTGACTGCTTCTTGAGAGGTTAGTACACGACTGCTGAGCTGTCTTAAGAAGCCTCAAGTGTGTAAGTCAGGGCTTAGCAAGATAAAATGACCTGGCATTGTGTTTTCACTCAGGGTGCACTGGGTGCCTTTCAGCCCTCTTCAGATTGTGGCCTTATACCGGTATCTATGCACCGAATGTCACCAGCCTGTGTTGTTTCTATTCAGTCTAATTAAAAAACAAACAAAACAAAAAGCCCTCAAGAAAAAAAGGGGGGGGGTGCTTGGACTTTGTGTCTTTGATCTTATTTGTCTAGGAATTTACTTTTTATTGTTTAAACCCCACAAAGCCAAGGTGACCCCAGATGACTGGATAGTCACGAAGTGCACTGTTCTGCCTACCCTGGAGAAGTAGACTTGTCCTCATACACAGAGGGACCGTCTTCCGCTGCCTCCCCTTTACCAACCCAACGATGTTGCCTCTTTGACCTCGTTTTCAGGATGAGGTTAAGAATCTTCACATTACTACTATCTA