Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Entr1
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name endosome associated trafficking regulator 1
Also known as Sdccag3
Coordinate chr3:3827498-3834219
Strand -
Gene summary Predicted to be involved in several processes, including endocytic recycling; positive regulation of cilium assembly; and positive regulation of protein localization to cilium. Predicted to be located in endosome. Predicted to be part of retromer complex. Predicted to be active in endosome; microtubule organizing center; and midbody. Orthologous to human ENTR1 (endosome associated trafficking regulator 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Entr1

Retroname Coord Strand Genomic Region ENSG
Sdccag3P1 chr6:82908366-82910425 + Intergenic
 N/A UCSC
Sdccag3P3 chrX:7049655-7051767 + Intergenic
 N/A UCSC
Sdccag3P2 chr16:18379590-18381637 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001013135.2
GGCGTTCGGCGCAGGCTTCCGGCCGGCCGCGCCGGATGAGGCAGGGGCTGGCGACGGCGTTGTGGGCCATGGGGCCGCGGCCGGGTTAGGGCGCGGCGATGTCGGGCTACGCGCGGCGGCAGGGCGCGCCCCCACTATCGCGGACGCGGAGCCTCGTAGTTCCCGAcgCTCCTGCgttctatgagcgccggtcttgtctcccccagctagactgtgaacgcccccatggcggggaccTGCACCCCCAGTTCTTCGGCTTTCGGCCGACGTTTATGTGCTATGTGCCCAGCCCGGTGCTGGCTTCGGTAGGAGACACAGATTTTGGCTATGGAAAGGGGAAATGTACTAAACAAGGCCCGTCGGGAGCCCATGAGACGCGCTTTGGAGGTGACAAACTTGAAGACCTTGAAGAAGCCAATCCATTCTCCTTCAAAGAGTTTTTGAAAACCAAGAACCTCAGCCTGTCAAAAGAAGACACAGCCACCAGTCGAATTTACCCGAAGGAGGCCTCGAGGCACCCActgggactagaccacaactcccctgtctcccagcccatgGGATATGGCCTGGAATATCAGCAGCCATTTTTTGAAGACCCAACAAGAGCCAGCAACCTAGAGGAGGATGAAGAGGACGGGTGGAGCAGAGCCTACCTGCCGTCTGCCGTGGAGCAGACTCACTCCACGAGAGCCACGCAGAACTCATCGCCCTGTGGCACCTACCTTTCCTTCTTTTCCAACGCGTCAGAGCTGGCAGGTCCTGAGTCTTTGCCCCCATGGACACTGAGTGACACTGACTCCAGGCTCTCCCCAGCGTCTCCAGCTGGGAATCCTAATGTAGACTTTGCAGCTCATGAAGAATCCTTAGGGGACAGACACCTGCGGACGCTGCAGTTAAGTTACGAAGCACTGAAAGATGAAAACTCTAAGCTCAGAAGAAAGCTAAGTGAGGTTCAGAGCTTCTCTGAAACTCAAACAGAAATGGTGAGGACGCTCGAACGGAAGTTGGAGGCGAAGATGATCAAGGAAGAGAGTGACTTCCATGACCTGGAGTCAGTAGTCCAGCAAGTCGAACAGAACCTCGAACTGATGACCAAACGGGCTGTAAAAGCAGAAAATCATGTCATGAAGCTGAAACAGGAAGTAAATTTGCTCCAGGCACAGCTCTCCAACTTCAAGCGAGAAAACGAAGCCCTTCGGTCAGGCCAGGGTGCCAGCCTTACCGTGGTGAAGCAGAACACCGATGTGGCCTTGCAGAACCTCCATGTTGTCATGAACAGTGCACACGCATCTATAAAGCAGCTGGTGTCTGGAGCAGAGACACTGAACCTTGTTGCTGAAATCCTCAAGTCTATCGACAGAATTACTGAAGTTAAGGATGAGGCAGACTCTTGAGAACACGACCTGCCGCCGGGTCCCGGCACCTCTGCACCGATGGCACCACACAGCTTCCAACTGTGCTCCTAACTAAGCAGTCCTCACCAAACCATCTCACAGCCTAAGCACGTGACCGGGCACCTGCAGTACAGGGCTCCTTTCCACCGGTTGCACCTAACAGTTTACATGAAGTCCTTTGGGGAAGTCCCACTGTTTGATAGACTCACTGATTTACTGGAAGACATTTTTATAAAACCCAGCAATTTTTAGAAAGCACTAAAGCTGAAACAACAGTTTGGTAAAAAGCTGCTTCCACTGTCCCTCAGATTTACTATAGGATGAGCTCGGGCTCAGGGCCAGTTTTACTAAGCAGAACACTAAGTGAGCCAGTGTGGAAGCGAGCAGCCTGTACAGGACTCTTGCTGTCACTCTGCCTCACGAACAGACGTTGACATTGTGGCCTTCACGGACGGCTCCTGCTGTCAGCAGCCTCACCGAGGCAGCACCACTCGGTAGATGCTGCTGTCCTACCAGGACCCTAGTACCAAAGTCACAGACTGCATTGCAGAGCGTCACACACGCACTACTCTGGGCTACCAGCTTCGGGAAGCCATTTGAGGCTGTTGGTTTTGATGAGTGTTAATGTGTCAGTGCATCTTTTGCATAGTGCGGTTCAGACTGGAATTAGAGCACACACCTACCTGCCTCAGGTCAGCACCAGTTCTTTGGGCTGGCTGGCTGGTTTTGAAGGACAAGCAGACAAAAGCAGCACCCTGTGCTGTGCTGAGGGGTCAGGGTTTGGGGACCACTTTCCTATAGATTTTTTAAATTTCCCTCTTCCCCTCCTGTTGAGATCAACAGCTTTCTTATCTAAATAAATCTTGAAGATCATTTA
>XM_006233682.3
TCGGCGCAGGCTTCCGGCCGGCCGCGCCGGATGAGGCAGGGGCTGGCGACGGCGTTGTGGGCCATGGGGCCGCGGCCGGGTTAGGGCGCGGCGATGTCGGGCTACGCGCGGCGGCAGGGCGCGCCCCCACTATCGCGGACGCGGAGCCTCGTAGTTCCCGAcgATTTTGGCTATGGAAAGGGGAAATGTACTAAACAAGGCCCGTCGGGAGCCCATGAGACGCGCTTTGGAGGTGACAAACTTGAAGACCTTGAAGAAGCCAATCCATTCTCCTTCAAAGAGTTTTTGAAAACCAAGAACCTCAGCCTGTCAAAAGAAGACACAGCCACCAGTCGAATTTACCCGAAGGAGGCCTCGAGGCACCCActgggactagaccacaactcccctgtctcccagcccatgGGATATGGCCTGGAATATCAGCAGCCATTTTTTGAAGACCCAACAAGAGCCAGCAACCTAGAGGAGGATGAAGAGGACGGGTGGAGCAGAGCCTACCTGCCGTCTGCCGTGGAGCAGACTCACTCCACGAGAGCCACGCAGAACTCATCGCCCTGTGGCACCTACCTTTCCTTCTTTTCCAACGCGTCAGAGCTGGCAGGTCCTGAGTCTTTGCCCCCATGGACACTGAGTGACACTGACTCCAGGCTCTCCCCAGCGTCTCCAGCTGGGAATCCTAATGTAGACTTTGCAGCTCATGAAGAATCCTTAGGGGACAGACACCTGCGGACGCTGCAGTTAAGTTACGAAGCACTGAAAGATGAAAACTCTAAGCTCAGAAGAAAGCTAAGTGAGGTTCAGAGCTTCTCTGAAACTCAAACAGAAATGGTGAGGACGCTCGAACGGAAGTTGGAGGCGAAGATGATCAAGGAAGAGAGTGACTTCCATGACCTGGAGTCAGTAGTCCAGCAAGTCGAACAGAACCTCGAACTGATGACCAAACGGGCTGTAAAAGCAGAAAATCATGTCATGAAGCTGAAACAGGAAGTAAATTTGCTCCAGGCACAGCTCTCCAACTTCAAGCGAGAAAACGAAGCCCTTCGGTCAGGCCAGGGTGCCAGCCTTACCGTGGTGAAGCAGAACACCGATGTGGCCTTGCAGAACCTCCATGTTGTCATGAACAGTGCACACGCATCTATAAAGCAGCTGGTGTCTGGAGCAGAGACACTGAACCTTGTTGCTGAAATCCTCAAGTCTATCGACAGAATTACTGAAGTTAAGGATGAGGCAGACTCTTGAGAACACGACCTGCCGCCGGGTCCCGGCACCTCTGCACCGATGGCACCACACAGCTTCCAACTGTGCTCCTAACTAAGCAGTCCTCACCAAACCATCTCACAGCCTAAGCACGTGACCGGGCACCTGCAGTACAGGGCTCCTTTCCACCGGTTGCACCTAACAGTTTACATGAAGTCCTTTGGGGAAGTCCCACTGTTTGATAGACTCACTGATTTACTGGAAGACATTTTTATAAAACCCAGCAATTTTTAGAAAGCACTAAAGCTGAAACAACAGTTTGGTAAAAAGCTGCTTCCACTGTCCCTCAGATTTACTATAGGATGAGCTCGGGCTCAGGGCCAGTTTTACTAAGCAGAACACTAAGTGAGCCAGTGTGGAAGCGAGCAGCCTGTACAGGACTCTTGCTGTCACTCTGCCTCACGAACAGACGTTGACATTGTGGCCTTCACGGACGGCTCCTGCTGTCAGCAGCCTCACCGAGGCAGCACCACTCGGTAGATGCTGCTGTCCTACCAGGACCCTAGTACCAAAGTCACAGACTGCATTGCAGAGCGTCACACACGCACTACTCTGGGCTACCAGCTTCGGGAAGCCATTTGAGGCTGTTGGTTTTGATGAGTGTTAATGTGTCAGTGCATCTTTTGCATAGTGCGGTTCAGACTGGAATTAGAGCACACACCTACCTGCCTCAGGTCAGCACCAGTTCTTTGGGCTGGCTGGCTGGTTTTGAAGGACAAGCAGACAAAAGCAGCACCCTGTGCTGTGCTGAGGGGTCAGGGTTTGGGGACCACTTTCCTATAGATTTTTTAAATTTCCCTCTTCCCCTCCTGTTGAGATCAACAGCTTTCTTATCTAAATAAATCTTGAAGATCATTTA
>XM_006233685.3
TCGGCGCAGGCTTCCGGCCGGCCGCGCCGGATGAGGCAGGGGCTGGCGACGGCGTTGTGGGCCATGGGGCCGCGGCCGGGTTAGGGCGCGGCGATGTCGGGCTACGCGCGGCGGCAGGGCGCGCCCCCACTATCGCGGACGCGGAGCCTCGTAGTTCCCGAcgGTGACAAACTTGAAGACCTTGAAGAAGCCAATCCATTCTCCTTCAAAGAGTTTTTGAAAACCAAGAACCTCAGCCTGTCAAAAGAAGACACAGCCACCAGTCGAATTTACCCGAAGGAGGCCTCGAGGCACCCActgggactagaccacaactcccctgtctcccagcccatgGGATATGGCCTGGAATATCAGCAGCCATTTTTTGAAGACCCAACAAGAGCCAGCAACCTAGAGGAGGATGAAGAGGACGGGTGGAGCAGAGCCTACCTGCCGTCTGCCGTGGAGCAGACTCACTCCACGAGAGCCACGCAGAACTCATCGCCCTGTGGCACCTACCTTTCCTTCTTTTCCAACGCGTCAGAGCTGGCAGGTCCTGAGTCTTTGCCCCCATGGACACTGAGTGACACTGACTCCAGGCTCTCCCCAGCGTCTCCAGCTGGGAATCCTAATGTAGACTTTGCAGCTCATGAAGAATCCTTAGGGGACAGACACCTGCGGACGCTGCAGTTAAGTTACGAAGCACTGAAAGATGAAAACTCTAAGCTCAGAAGAAAGCTAAGTGAGGTTCAGAGCTTCTCTGAAACTCAAACAGAAATGGTGAGGACGCTCGAACGGAAGTTGGAGGCGAAGATGATCAAGGAAGAGAGTGACTTCCATGACCTGGAGTCAGTAGTCCAGCAAGTCGAACAGAACCTCGAACTGATGACCAAACGGGCTGTAAAAGCAGAAAATCATGTCATGAAGCTGAAACAGGAAGTAAATTTGCTCCAGGCACAGCTCTCCAACTTCAAGCGAGAAAACGAAGCCCTTCGGTCAGGCCAGGGTGCCAGCCTTACCGTGGTGAAGCAGAACACCGATGTGGCCTTGCAGAACCTCCATGTTGTCATGAACAGTGCACACGCATCTATAAAGCAGCTGGTGTCTGGAGCAGAGACACTGAACCTTGTTGCTGAAATCCTCAAGTCTATCGACAGAATTACTGAAGTTAAGGATGAGGCAGACTCTTGAGAACACGACCTGCCGCCGGGTCCCGGCACCTCTGCACCGATGGCACCACACAGCTTCCAACTGTGCTCCTAACTAAGCAGTCCTCACCAAACCATCTCACAGCCTAAGCACGTGACCGGGCACCTGCAGTACAGGGCTCCTTTCCACCGGTTGCACCTAACAGTTTACATGAAGTCCTTTGGGGAAGTCCCACTGTTTGATAGACTCACTGATTTACTGGAAGACATTTTTATAAAACCCAGCAATTTTTAGAAAGCACTAAAGCTGAAACAACAGTTTGGTAAAAAGCTGCTTCCACTGTCCCTCAGATTTACTATAGGATGAGCTCGGGCTCAGGGCCAGTTTTACTAAGCAGAACACTAAGTGAGCCAGTGTGGAAGCGAGCAGCCTGTACAGGACTCTTGCTGTCACTCTGCCTCACGAACAGACGTTGACATTGTGGCCTTCACGGACGGCTCCTGCTGTCAGCAGCCTCACCGAGGCAGCACCACTCGGTAGATGCTGCTGTCCTACCAGGACCCTAGTACCAAAGTCACAGACTGCATTGCAGAGCGTCACACACGCACTACTCTGGGCTACCAGCTTCGGGAAGCCATTTGAGGCTGTTGGTTTTGATGAGTGTTAATGTGTCAGTGCATCTTTTGCATAGTGCGGTTCAGACTGGAATTAGAGCACACACCTACCTGCCTCAGGTCAGCACCAGTTCTTTGGGCTGGCTGGCTGGTTTTGAAGGACAAGCAGACAAAAGCAGCACCCTGTGCTGTGCTGAGGGGTCAGGGTTTGGGGACCACTTTCCTATAGATTTTTTAAATTTCCCTCTTCCCCTCCTGTTGAGATCAACAGCTTTCTTATCTAAATAAATCTTGAAGATCATTTA