Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Taf5l
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name TATA-box binding protein associated factor 5 like
Also known as -
Coordinate chr19:56781854-56801005
Strand -
Gene summary Predicted to enable transcription coactivator activity. Predicted to be involved in histone H3 acetylation; regulation of somatic stem cell population maintenance; and regulation of transcription, DNA-templated. Predicted to be located in cytoplasmic ribonucleoprotein granule and nuclear speck. Predicted to be part of SAGA complex and transcription factor TFTC complex. Orthologous to human TAF5L (TATA-box binding protein associated factor 5 like). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Taf5l

Retroname Coord Strand Genomic Region ENSG
Taf5lP1 chr1:180535734-180538505 + Intergenic
 N/A UCSC
Taf5lP2 chr1:60105986-60109727 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_008772614.1
TGCCGGGGCGGCGGCGGGGCAGCGGGAGCCGCCTGGGATGTTCAGTCATGAAACGAGTGCGCACGGAGCAGGTTCAGGTGGCAGTGTCCTGCTACCTCAAACGCCGGCAGTACGTGGACTCAGAAGGCCCTTTGAAGCAAGGCCTGAGACTCTCACAGACCCCTGAGGAGATGGCGGCCAACCTCACAGTCCAATCAGAATCTGGTTGTGCCAATGCGGTGTCTGCAGCCCCTTGCCAGGCAGAACCCCAGCAATATGAAGTACAGTTTGGACGACTGAGGAACTTTCTCACTGATTCTGACTCCCAGTACAGCCATGAAGTTATGcctctcctctaccctctctttgtctacctccacctcaacctGGTCCAGAGTGGCCCCAAGAGCACCGTGGAAAGCTTCTATAGCCGCTTCCATGGAATGTTCCTGCAGAATGCAAGTCAGAAGGACATCATCGAGCAACTGCAGACCACGCAGACCATCCAGGATATTCTGTCAAACTTCCAGCTTCGTGCATTCCTGGACAACAAGTATGTGGTCCGTCTCCAGGAAGATAGCTACAACTACCTTATCCGCTACCTCCAAAGCGACAACAACACTGCCCTGTGCAAGGTGCTCGCCGTGCACATTCACTTGGACGTGCAGCCTGCTAAGAGGACAGACTACCAGCTGTATGCCAGTGGTGGCTCCTCCCGCAGTGAAAGCAGCAGCCTGGAGCCACCAGATGTGCCCAACCCTATCCTGCAGAACGAGGCTGCCCTGGAGGTCTTGCAGGAGAGTATCAAGCGGGTCAAGGATGGACCTCCCTCCCTCACCACCATCTGCTTCTACGCCTTCTATAACACAGAGCAGCTGCTGAATACCGCAGAGATCTCCTCTGACAGCAAACTGCTGGCTGCTGGGTTTGACAACTCCTGCATAAAGCTCTGGAGCTTGCGGTCCAAAAAACTGAAGTCAGAGCCCCACTGTGTGGACACATCCCGTGTCCGGCTGGCTTGTGACACTCTGGAGGAGGAGGAGAGCGAAGACGATGACGTAGGCACGGAAATGAAGATTCTGCGGGGACACTGTGGCCCAGTGTATAGCACACGGTTCCTCGCGGACAGCTCAGGGCTGCTCTCTTGTTCTGAAGATATGTCCATCAGGTACTGGGACCTGGGGAGCTTCACCAACACTGTGCTGTATCAGGGACATGCCTACCCTGTGTGGGACGTGGACATCAGCCCCTACAGCCTGTACTTTGCCAGTGGGTCCCATGACCGTACCGCCAGGCTGTGGTCTTTTGATCGGACGTACCCGCTGAGGATATATGCGGGGCACCTGGCAGATGTGGACTGTGTCAAATTCCACCCCAACTCAAACTACTTAGCTACTGGCTCCACTGACAAAACTGTTCGTCTATGGAGTGCCCAGCAGGGGAACTCAGTGCGGCTTTTTACAGGTCACCGAGGCCCCGTGCTCTCCCTCTCCTTTTCTCCCAATGGTAAGTACTTGGCATCTGCTGGTGAGGACCAGCGGTTAAAGTTGTGGGACTTGGCCTCTGGGACACTTTTTAAAGAACTGAGAGGCCACACGGACAGCATCACCAGTCTGGCCTTTAGCCCGGACAGCGGTCTGATTGCTTCTGCCTCCATGGACAACTCTGTACGCGTCTGGGACATCAGAAGCACGTGCTGCAACACACCAGCTGACGGCTCTTCTGGGGAGCTTGTGGGCGTGTACACTGGGCAGATGAGCAACGTCCTGAGTGTACAGTTCATGGCCTGCAACCTCCTCCTAGTGACTGGAATCACACAAGAGAATCAAGAACATTAAGTTTTGATCCAGGTGGCAGACTGGGTGGGGCTGGAAGAGTGGTCACAGTCCAGGACTTGCTAAAACTGAATCAGTGATTGCAAAAGAGCCTTCCCCTACCCCACATGCACTCTACACAGCCCTGGTGCATAAGACTCCAGTTGAGAGCTGGGAAGCTCCCCCCAGGCCTGAGGCCTCCTGCTTCATGCAGGCATCGTGCTTTTGCATCTGTCTCTTCCCAGTGGGTGTACTGGACAGCTGCAGAACTCTCCCTATAGCAGCTGTAGACAGTCTCTCCTGTGGCTGCCCCTTGAGGGAAGTGGGGACAAAACCAGGatttttattatataattaattttattattGAGAAGAGGAAACCTAGCACTGGCAGCAAGTGACTCCTGGCACTGGCTATAATACTTGGAATTTTGAGGTTCAGGGAATTTAGACTCTGGTGGCCCAGTGTATCAGGAGAAAGGGGCACCATAACCATATGCTGTGCTTCTGTGGGCAGGCAGGCAGGTAGCGACTGAGCATGGGCTCCTGCAGTGATGGCGGCAGAGGTGGTTCTTCCATTGGCTGCACTTTTGTCAGCCTTTATACCCTGGGGAGAAGCACTGTGGTGGGCAGAGGGTGAGCCTCAGCGCTGCGCCAGTCACCTAGGGTTCCAGCCCTACACCATCAACAAATTATGATAAAGAGTAATTTTGAATAAGTCACAAGATAGACAAGAAATGCTGGATTTAAAGATAACTTTTTGTGGCTCGTTGGTCATTTTTCTCCCTCAATGACCTGCTTCCACCTCACTGCAGTGTTGATAGTGAACGGGATGAATCATGAGTGCACACTCAAAAATATCGACCATGCTCTAAGGACAAAGCAAGTTCTGATGTCTGCTAAAGGATTAAATATTTCTGTTTTCTGAAAAGAGTTATTTTGTATTTTGTTTTCTATTAAAATGTATTTAGTTTCAAAAA