Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Pdcd6
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name programmed cell death 6
Also known as ALG-2
Coordinate chr1:31576183-31591852
Strand +
Gene summary Predicted to enable several functions, including metal ion binding activity; protein homodimerization activity; and ubiquitin ligase-substrate adaptor activity. Predicted to be involved in several processes, including mesenchymal cell differentiation; negative regulation of signal transduction; and positive regulation of cellular protein metabolic process. Predicted to act upstream of or within activation of cysteine-type endopeptidase activity involved in apoptotic process and apoptotic process. Predicted to be located in several cellular components, including cytosol; endoplasmic reticulum exit site; and nucleoplasm. Predicted to be part of COPII vesicle coat and Cul3-RING ubiquitin ligase complex. Orthologous to human PDCD6 (programmed cell death 6). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pdcd6

Retroname Coord Strand Genomic Region ENSG
Pdcd6P1 chrX:106781172-106782251 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001107452.1
AGTGACTCAAAGGCACGCGCTTCCGTTGTTCCCAGGAAGTTGTGGGCTCCTGGTTCTGCCCCTGACTTGAGGCGGAAGCACAGCTTTTGGAGCTGGGCCGCGGGACCGCTGTGCATCAGCCCATGGCTGCCTACTCCTACCGCCCAGGCCCAGGTGCTGGCCCTGGCCCTGCTGCTGGAGCTGCACTGCCAGACCAGAGCTTCCTGTGGAACGTCTTCCAGCGGGTTGATAAAGACAGGAGCGGAGTGATTTCAGACAATGAACTTCAGCAAGCATTATCCAATGGTACATGGACTCCGTTTAATCCAGTGACTGTGAGGTCAATCATTTCTATGTTTGACCGAGAAAACAAGGCTGGTGTGAACTTCAGTGAATTCACAGGTGTGTGGAAGTATATCACAGACTGGCAGAATGTCTTCCGGACCTACGACAGGGACAACTCTGGGATGATTGACAAGCATGAGCTCAAACAAGCACTCTCAGGTTTTGGCTACCGGCTCTCTGATCAGTTCCATGACATCCTCATCCGAAAATTTGACAGGCAAGGACGAGGGCAGATCGCGTTCGATGACTTCATCCAGGGCTGCATCGTCTTGCAGAGGTTGACAGACATATTCAGACGCTATGACACGGATCAGGATGGCTGGATTCAGGTGTCTTACGAGCAGTATCTCTCCATGGTTTTCAGCATTGTATAACCAGGCCTTGTGAACATCCAGCACGGCATGCAAAAAACTGAAGATGCCAAATTCCTTACCTGTGCTAGAACAGGGCATGGCTGCAGTGAGACGCTGCCCTTCCCGTTGACTGTATAGCTAATTCTTGGGGACCTGGCTGTACATATGTGAATACTCTGGTCAGTGACTCTGTAGTGGCAATCTAGCTCCACTGTTAGAACACAGACGTTGGGGTTGCTGACTGATTGTGCCATGAGGTGAGACCTAATAATGGTTCAGGATTCTGCTCCCAAACTATCATGTTCTTTTCTAGATGCCTCTAATTCTGTAGTCGAGATGCTCTCCTTAGCCAATAGAATGTTAATATAATATGGAACTTGCACAGAAGGCTTTTCATGTGCCTTACTTTTTAAAACGAAATTTTATCCATTGGAATATGTAACATAAGCAATAAAGTAATGATACAGACtgtctagttttggctggtttttgttttgttttgttttgctttAACTAAACAGGTGGAAGAAATGTACCCTTTGTTACCACTCTAGTTGTTGTGTGAACATGGGAGAGTGGGACCTAAAAATAACGCAGACTGAAGTCTCACACAATAGCCAATTTTATTTAGAGCATCAGAAAATGTATACTCTTGAGTGTGAAGAAGAATCACATGCGAGATGTTCAATCACAAAGACATGGCAAAAGCATGTTTTTTCTGTGAAGGCACATGAATGACAGCTGCTGCAGTAAACTCCTGTCTGCCATAGCTGGGAAAAGCACAACACCACATCCAGGACCAAGTCTATGTATGAAGAACAGGTCGTGTAGCATAAACAATAAAGTGTTGATAC