Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Kmt5c
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name lysine methyltransferase 5C
Also known as Suv420h2
Coordinate chr1:72666662-72674271
Strand -
Gene summary Predicted to enable several functions, including S-adenosyl-L-methionine binding activity; histone binding activity; and histone methyltransferase activity (H4-K20 specific). Predicted to be involved in DNA repair; histone H4-K20 trimethylation; and positive regulation of DNA metabolic process. Predicted to act upstream of or within histone methylation. Predicted to be located in condensed chromosome, centromeric region; nucleoplasm; and pericentric heterochromatin. Predicted to be active in nucleus. Biomarker of liver benign neoplasm. Orthologous to human KMT5C (lysine methyltransferase 5C). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Kmt5c

Retroname Coord Strand Genomic Region ENSG
Kmt5cP1 chr20:318227-318586 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001107475.1
GGTTGAGTTGTCTGTCTTTCCGGCCGAGGGGAGGCGCGGCGGCTGTATCTGACGAGAGCCGGAGGAGGCGGTGGGTGGAGGTGGCGGCTGCAACGCGGGCGCCggaggaggaggaggaggaggaggaggaggaggagaaggaggaggagAAGCGGGAGTTCCCCCAAACCCTGCTTGGAACCGCTAAGCCCTTCCCTTGGACCCTGGGCGTATGTACCCTTTGGATTTCGTGGTCTCCTCCCTTGCAACCGCAGATAAGCAGGCTCTGGGGCCCACAGACATCCCATGTAGCTTCTGAGTGGCATATCCATGTGCCCTGTTCTGTGCCAGAAGCAGCATGGTTTATAGAGCACCATGGGGCCTGACCGAGTGACAGCCCGAGAACTGTGCGAGAATGATGACCTGGCCACCAGCCTTGTTCTTGACCCCTACCTCGGCTTCCGCACCCATAAGATGAATGTCAGCCCTGTGCCCACCCTCCGACGACAACACCACCTTCGCTCAGCACTGGAAGCTTTCCTAAGGCAACGGGACCTGGAAGCTGCATTCCGGGCCCTGACACTGGGAGGCTGGATGGCCCACTACTTTCAGAACCGTGCTCCTCGGCAGGAGGCTGCCCTCAAGAACCACATTTTTTGCTACCTCCGCGCCTTCCTGCCTGAGAGTGGCTTCACCATTCTGCCCTGCACCCGCTACTCCATGGAGACCAATGGGGCCAAGATTGTGTCTACCCGTGCTTGGAAGAAGAATGAGAAGCTGGAGCTGCTGGTGGGCTGCATTGCAGAGCTGCGGGAAGAGGATGAATACCTACTTAGGGCAGGCGAGAACGACTTCAGCGTCATGTACTCCACTCGAAAAAGGAGTGCCCAGCTGTGGCTTGGCCCAGCTGCCTTTATCAACCATGACTGCAAACCCAACTGCAAGTTTGTGCCCTCAGATGGAAATACTGCCTGTGTGAAGGTGCTACGGGACATTGAGCCGGGGGATGAAGTAACTTGCTTCTATGGCGAGGGCTTCTTCGGTGAGAAGAATGAGCACTGTGAATGCTATACCTGTGAGAGGAAAGGCGAGGGAGCTTTCAGACTTCAGCCCAGGGAGCCGGAGCTGAGGCCACGGCCCCTGGACAAGTATGAGCTCCGAGAGACAAAGAGGCGTCTGCAGCAGTGTTTGGACAGCAGCCAGCAGAACCTGCTGAGCCTGCGGGCCTGCTCCCACCTGTCCCCACTGCGCCCTGACCCATTCTGTGctgcctgccagccctcatgcctgctgcctgTCAGTCCCCACATGGACTACTTGCCCCTCTGGCTCCAGTGGGTGCCTCAGCCCCAGCCCAGAGTACGTCCCCGGAAGcgccgccgtcgccgccgccgtcgccCCAGGATACCCCAGGCTTCATTGTCCCCTGACCTGCACACTGCCTGTGTATCCCTACACCGATGGGGAGGCTGTGGTCCCCACTGCCAACTACGGGCTGAGGCCATGGTGACCCTACACCTGCTCCCCCAGACTCGCTGGACCCCAAAACAGGACTGGTACTGGGCCCGACGCTATGGGCTACCTTCTGTGGTGCGCGTTGAACTTTCCCCTCTAGCCCCAGCCCTACCAGCTGCTCCTGCTCCTGCTGGGAACCTAGGTCCCACCCCCACCCCTGACCTCATACCTAAACAGGCCCTTGCCTTCGCTCCTTTCTGCCCACCTAAGCGCCTCCGGCTAGTGGTCAGCCATGGTTCTATTGATCTGGACATCAATAGTGGTGAGCCATGATGGGCTGCTTACAGGGAGCCCTGAATGGAAGGTAGAGTCTCTGTCTTGGACCCCTCCAGAAGGGAAAGAGGAAACTGACCCTTAACCCAGGTCTGATCTTGGGAGTGTGTTGTTGGGGACATCCCTAGAGAGTTTGATCCTTGTTGCTCTATGGTTGCTGACCCCTGAGCCAGCCCCAACTCAGCAGGGAGCCCTGGCCATTTGATGTCCCCATCCCTGTCCCTGCCCCCACCTCAGGACTGTAGGAGTCATTCCCCTCCCCTCAGCCTCTTCCTCCCCAGGGAGCAAAGCCATAGGGGTTGGGGGCCACTCCATGGCAACTCTCCAGAAGGCCAGGCCTCAGGAGGTGGAATTGACTTGGGGGTTTGCCTTCCCAAACTACTCCCAGAGTGGGGAGTAAGTTGGCGCTCAGCTCTGCAGTTGATGGAGGTACGGGCTGTCAGATGGGGTGGGTTGTACCCAGGGACACAACCTTGGCTCTGAACATGGGTCTCAGGGAGGCCAGGTGTGACCTCATCTTTTTCACGGTGCTATCCCTGGTGCTACTGGGGTGTAGGGGAGGCTCCCTCTCCTCCCCACACCAGAATGGGGTATGATGGGGGATTGGAAGAACTTGAACTTTTTATTAAAACATTGTAAGCCCT