Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Tsku
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name tsukushi, small leucine rich proteoglycan
Also known as Eiih
Coordinate chr1:163317281-163328697
Strand -
Gene summary Predicted to enable transforming growth factor beta binding activity. Predicted to be involved in several processes, including animal organ development; cholesterol efflux; and cholesterol homeostasis. Predicted to act upstream of or within several processes, including ciliary body morphogenesis; negative regulation of Wnt signaling pathway; and telencephalon development. Predicted to be active in extracellular matrix; extracellular space; and plasma membrane. Orthologous to human TSKU (tsukushi, small leucine rich proteoglycan). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tsku

Retroname Coord Strand Genomic Region ENSG
TskuP1 chr1:24164484-24165066 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>XM_006229761.3
CGGAGCCGGTGCAGCCACTGGGTGCCGAGCAAGGGGAGCCCGGCGGCGGGCGGGGACGTGGGGCGGGACGTGCGGGCTCCGAGAAAAGCGCTGGCCCACGGGCCAACGCCGGGTCGCCTAGGTGAGCGTGCCGAGGCGACAGCTGCCGACCTGCCAGGTGGGTGCTGTCCCGAAGCGCAGCGAGATCGGCGCCGGTTTGGAGGTTTGGAGCCCGGGACTTCAACCTCACCGCCCCATCCTGTGAGCAGGCCGGTGCGAGGGGCGGGTCCGGGTCCTGCTGAGGCCCCTCAACTTTTCCGGGACACGGAGCCACAGCGGCGCAGGGTCCGGGGAGCAGGGGTGTCACCATGTTGTGCACCCTGTTCCTGCTACTGCTGGCCCTGGGCACAGTGCAGACAACTCGGCCATGTTTCCCTGGCTGCCAGTGTGAGGAAGAGACGTTTGGCCTCTTTGACAGTTTCAGCCTGATCCGAGTGGACTGCAGCAGCCTGGGCCCCCACATTGTGCCTGTGCCCATCCCTCTGGACACAGCCCACCTGGACCTGTCTTCCAACCGGCTAGAAACCGTGAATGAGTCAGTCCTGGGAGGGCCAGGCTATACCACACTGGCTGGCCTGGATCTCAGTCACAACCTCCTCACCAGCATCACGCCCACTGCCTTCTCCCGCCTTCGCTACCTGGAGTCACTGGACCTCAGTCACAATGGCCTGGCAGCCCTGCCAGCAGAGGTTTTCACCAGCTCCCCCTTGAGTGATATCAACCTGAGCCATAATCGACTTAGAGAGGTCTCAATATCTGCCTTCACCACCCACAGCCAGGGGCGGGCACTGCACGTGGACCTATCCCACAATCTTATCCACCGCCTGCTCCCCTATCCAGCCAGGGCCAGCCTGTCCGCACCTACCATTCAGAGCCTGAACCTGTCCTGGAACCGGCTCCGAGCCGTGCCCAATCTCCGAGACCTACCCCTGCGTTACCTGAGCCTGGATGGGAACCCTCTGGCTACCATCAACCCAGGCGCCTTCATGGGGCTGGCGGGCCTCACCCACCTTTCACTGGCAAGCCTACAGGGTATCCTCCAGCTACCACCCCATGGCTTCCGAGAGCTCCCAGGCCTTCAGGTCCTGGACTTGTCTGGTAACCCCAAGCTCAAGTGGGCAGGAGCCGAGGTATTTTCAGGCCTGGGTTTGCTGCAAGAACTAGACCTGTCTGGCTCCAGCCTGGTGCCCCTGCCTGAGACGCTGCTACATCACCTCCCTGCTTTACAGAGTGTCAGTGTAGGCCAAGATGTGCAGTGCCGGCGTCTGGTACGGGAGGGTGCCTACCACCGCCAACCCGGTTCCAGCCCTAAGGTAGTCCTGCACTGTGGAGACACCCAGGAATCTGCCAGGGGCCCAGACATCTTGTGACGAATGGTGTGGCCTGAGGCCACTTGACAGACTGCTGTCCTGGGCTTGCTCAGGTCCCCACTAATATTTTAATGTGCCAATGCCTGTGGAGTGTCTACAGGTCTAAGTGGCAGCCATCTCAGTGAAGATGTGGGCCAAGGATAGTTTTCATACCTAGGGCCTATACCCAATAACAGAATCTGCCCGCTTGTCTCAGCGGCTCACTTCCCTGAGCTATGAGCAAAGGGACTTCGATGCCAAACCAGACTTTGGTCCCTTCCTGAGCCCTGCCCCAGTTATCTCTAAGTGCCTTCCCTTTTGCCCAGACTGACCTGACCCATGATGTAAGGACCGTAGGGGAGCACCACCACTGCAAAGGCTGACTAAGGTCTGTTGGGCTAAAGGTCTCTTTGAGCCCAGTGTCTATAGTCACACCTTCTTTGCTCTGGGCCCAGGAGGCCTACTTCTTCTTTTTCTCGTGGAATCCTGGAATCTTAAAGATAAAAGAACCTAGAAAGAAAATCAAACCCATTTTCCTTGTGGGGCAGATGGTAATATGGGACTGAGAACAGCAAACCTGGGGTCTTGGAGAGGAGCCCAGCCTCCTGTTGAGGTTGAGAGCTCTGTCACCCTCCCTTCCCCTGCTGGGTACCCTGTTACTATTGTCTGTACTGTTTTCCATTGTGCCCAGCAGTAGCAACAACAAGGTCACAGAGGTGGGAACTCTAGGTCCAGTGGCCAGCTTATGGTGTGAGCGTAGTCAGTCCCCCTTTCAGAGCCTCAGGAAGCTTGGAGCACCTCAGTCTCAAGCCTGTCAGTTCCTTACTCTGGGATGACCCCCAACATCAAGACTGGAAACATACACATTCTCCCCAGGGACACAGTCTTAAGATGCTTTTCTAAGAAGTCAATGCAGTTGTGACCATGTGGCCATGAGCTCCAAGGGACTCGTGGGCTTGGTGTCCATGGGCCGGAGCCCAAAGACCCGCTTCCCCCTCCAAGAGTATGGCAGAAAGGGTCTCCCATGCACATTGTGCTCCCCGCCAGGGCCACATCTCAGCTCTCCAGCTCTGGATTCTTTCTTCTGTTTTCATTTTATGAGTCGTTGTCTTTTTTAAAATGAACTGTTTAACCCCCACCTCTGCTGGCCAGGGGATGGAAAGGAAGATAAATGTATTTGTTCGCTTTTGTAAGACTCTGTTCTGGGTGTGGGCTGGGGATCTTGGGAAGAAGCCAGTTGGCTATCAGTAACCATGTGGGCATTGGGGCTGGTCCCTGGGATGCTCAAAAGTCAGTGAGAGCTCTGTCTTCTCACACTAGCCCAGCCCAGCCCACCCCGTGACTGGTCCTTGGTTTAATAAACACATGTAAGAGCTCTTTCCATCACTGGA