Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Twnk
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name twinkle mtDNA helicase
Also known as Peo1
Coordinate chr1:264756060-264762892
Strand +
Gene summary Predicted to enable several functions, including 5'-3' DNA helicase activity; identical protein binding activity; and protease binding activity. Involved in cellular response to glucose stimulus. Located in mitochondrion. Human ortholog(s) of this gene implicated in Perrault syndrome; autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 3; chronic progressive external ophthalmoplegia; and mitochondrial DNA depletion syndrome 7. Orthologous to human TWNK (twinkle mtDNA helicase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Twnk

Retroname Coord Strand Genomic Region ENSG
Peo1P1 chr1:150374660-150376894 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001107599.1
AGGAGAGTGGTGACGCGAAGctgggggcgggagcgtggagcttctgaagccgagggtagagccctggagcctgTAAGGGAGCCGGGTAGGAGCGCGTGACCTCCAGCTGTGTGGAGGGTCCCTGTGACTGCTAAGAGCTAAGAGCGCCTGGAGTTGGGGTTCAGACAGGATGCAGAGAGCTATAGAGATGAGGTTGGCGAGAAGAGTCCGTAGAGGGGTAGTAGACGTGAAGAGATGATACAGAGAAGCCTTTTAGATTGAGGGGCCGTAGAAGGCTTTAGAAGTGAGCTGGTGGAGAGAAATCGTAAAGGACCTACAAGTATGAGAGTCTTCAGAGAGGGGCGTAGACGCGAAAGGGTAGTATAGGTGTGTGGGGTTGAAGTAACAATATACAGGCAACCAAGGGGATTAAGAATTGTGTTCGTggggctggggatttagctcagtggtagagcgcttacctaggaagcgcaaggccctgggttcggtccccagctccgaaaaaaaaaaagaacaaaaaaaaaaaaaaaaaaacaaaaaaaacccaaaaaacaagaaTTGTGTTCGTAAAGAAATTTGAGGAGAAATAGAGAAAAGGTAGCAATAGTGAGTTCTGTGAGTTCTTGTGAAGGGCTCCTAGGGTCTGGCCTATTAAAGGTACAAAACCAGACACCAAAAGTTTTTGCAGTAGTGGCATCCCACTCCATTAGGAATGTGGCTCCTTCTCCGGCGTGCTTATCCCCTCCGGATCTTGCTGCCACTGCGTGGGGAGTGGATGGGTAGGAGAGGCCTGCCCCGAAGCTTGGCTCCAGGCCCTCCCCGAAGAAGGTACAGAAAAGAAGCGCTTCCAGCCTTAGAGGTACCAGTATCACCTGTGACTACAACTGAAATCCGCCAATATTTACGAGCACATGGGATCCCCTTCCAGGATGGCCACAGCTGCCTTCGAGCACCAAGTCCCTTTGTGGCACCCTCAGACATCAAAAATCAGAAGAAGGATGCTACCACTTCCTTCTGCCTCTTCATCGACAAGACCACAGGACACTTTCTCTGCATGACCAGCCTAGCAGAAGGGAGCTGGGAAGACCTCCAGGCCAGTGTGGAGGGACGAGGCGATGGGGCCAAAGAGGGAATCCTACTTGGGGAGGGCCCAGAAGCTGAGGACAGGGAGGAGGTCTTGAGAATCTGGAACCGAGCCATACCTCTTTGGGAGCTGCCTGATCCCCAGGAAACCCAGCTAGCTCGTGTGATGTTTGGCCTTACCAAGGTGACAGATGACACACTCAGGAGATTCAATGTCCGCTATCTTCGATCTACTCGAAGTCTGGTCTTCCCTTGGTTCACCCCTGGGAGCTCAGGATTACGTGGCCTGAAGCTACTAGGGGTTGAGGGTCAGGAAAATGGAGTACAGTATGTAGAGACCACCATTCCCCGGCCTGGTGTCTATCACAACCTATTTGGATTACCCCTGATCGGCCGTAGAGACACTGAGGTGGTCCTGACAAGTCGAGAGCTGGACAGCCTGGCCTTGAGCCAGTCCACGGGGCTGCCAACCCTTTCCCTACCCCGAGGAACGGTCTGCTTACCCCCAGCCCTACTCCCTTACCTCGAACAGTTCCGGAGGATTGTGTTCTGGCTAGGGGATGACCTTCGATCGTGGGAAGCTGCCAAACTGTTTGCCCGAAAACTGAACCCCAAGCGATGCTCTTTGGTGAGGCCTGGGAACCAACAACCTCGTCCCCTGGAGGCCTTAAACCAAGGCTTAAGTCTTCCCCGTATTCTCCGTACTGCCCTCCCTGCCTGGCACAAGTCTATTGTGTCTTTTCGCCAGCTCCGAGAAGAGGTTTTAGGAGAGCTATCAAATGTGGACCAAGCAGCCGGTGTCCGTTGGAGCCGATTCCCAGACCTTAATCGGCTGCTGAAGGGTCATCGGAAGGGCGAGCTGACGGTCTTTACAGGGCCAACAGGCAGTGGCAAGACAACATTCATCAGTGAGTATGCCCTGGACTTGTGTACCCAGGGAGTGAACACACTGTGGGGTAGCTTTGAGATCAGCAATGTGAGACTAGCCCGGGTCATGCTGACTCAGTTTGCTGTGACACGGCTAGAAGAACAACTGGACAAGTATGAAGAGTGGGCAGACCGTTTTGAGGACCTGCCTCTCTATTTCATGACTTTCCACGGACAACAGAGCATCAGGTCTGTCATAGACACAATGCAACATGCTGTCTACGTCTATGACGTTTGTCATGTAGTCATCGACAACTTGCAGTTCATGATGGGTCATGAGCAGCTCTCTACTGACAGGATCGCAGCTCAAGACTACATTGTTGGAGCCTTTCGGAAGTTTGCCACAGACAATAGCTGCCACGTGACTCTGGTTATTCACCCACGGAAAGAAGATGACGACAAGGAACTACAGACAGCATCCATTTTTGGCTCAGCCAAAGCCAGCCAAGAAGCAGACAATGTTCTGATCTTGCAGGACAGGAAGCTGGTGACTGGGCCTGGGAAACGGTATCTGCAGGTGTCCAAAAATCGCTTTGATGGAGACGTAGGCGTCTTCCCACTTGAGTTCAACAAGAGTTCCCTTACCTTCTCCATCCCACCTAAGAGCAAAGCCCGACTCAAGAAGATTAAGGATGACAATGGACTAGTGGCCAAGAAGTCCTCCTCTGGAAAAAAAGGGTCTGCGCACCAGAACTCTGAGACTTGCATAGGCCAGGACCCCTGCCAGCCAGATACCTCCCCGTCCTCAAGGTGAATGCAGTCAGAGCTGCTTGCTGAAGTGACCCTGGTGAACCAGGCTGACACAGACTCTTGGCCTTCTGCTGGGGCTCGTCCCGAGTGAGCCTTTCCCAGCCCAGGGCTCGGTTCCATGGTGAAAAGTTTAATTCAGCAGCTACTAAGGCTCTCCTATATGCTGGTTCAGGTTTTTTCCCCATAGGTTTTCATGTATAGCACTGAAAAGACAAAGTCTGTTTCCAAAGAACCAGCATCTTggggttggggatttagctcagtggtagagcgcttgcctaggaagcgcaaggccctgggttcaatccccagctccgaaaaaaaagaaccaaaaaaaaaAAAAAAAAAAGAACCAGCATCTTGGTGAAAGGAACAAAGCTAAGTGGGACTGCTCAGCTAGTTTTGATCAGTCACCCTAAAAAGATGGCTGATCAGAGTGCATGTGAGAACCATGGTCTGGTGAACCTCTGGAGAAAGGGATCCAGGTGGAGAAACACCAAAATCACAGGGGGGAATGAGCAAGTCAGATAAAGAGGGCGGACCCTGAACCTGCCACGAAACAGGAGGCTTGCTGGGACTCCAGCATGTTGGCATTCGGAGCGGAAGAGTAATGCAGTGGGCACCTCTCTGCTCTGCTTTGTCGAGCCAGGCATAAGAATTGATCTGAGGTGCTTATCCTGTGCTGTCAGAGCCTCAAAGCTGGACCATGGAGAGAAGCTGTGAGCCTGCAGTGCCTGCCCCCTTGATGCCGATTCCACTGTGTGCTGCTGCCTTGGACAGCGGGAGCTAGGACTCTTGGTGGAGCCTTTTCCAGTTGAATGAAGCATTTCTATGGCCTCTG