Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Siva1
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name SIVA1, apoptosis-inducing factor
Also known as CD27bp|Siva
Coordinate chr12:112611262-112615586
Strand +
Gene summary Enables CD27 receptor binding activity; tumor necrosis factor receptor binding activity; and virus receptor activity. Predicted to be involved in several processes, including activation-induced cell death of T cells; negative regulation of NF-kappaB transcription factor activity; and positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway. Predicted to act upstream of or within apoptotic process. Predicted to be located in mitochondrion and nucleoplasm. Is expressed in cerebral cortex ventricular layer. Orthologous to human SIVA1 (SIVA1 apoptosis inducing factor). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Siva1

Retroname Coord Strand Genomic Region ENSG
Siva1P1 chr3:108146615-108147307 - Intergenic
ENSMUSG00000083462 UCSC
Siva1P2 chr9:53791301-53791841 + Intragenic
ENSMUSG00000059830 UCSC

Expression

Transcript Sequences

>NM_013929.2
GCCCCCAGCCTTTCTCCGGCCTATTGGGCGCCGCGCCCTCGTCGGCTCGGGCCTCCGCCGCGGTCCGAGGGCGCCGTGACGTGTGCTCGGCGCGCGGCGCGCTGCGCGCTGCTGAAGGCTGTGTCTGGTACCCGCTACCATGCCCAAGCGGAGCTGCCCGTTCGCAGACGCAGCCCCGCTCCAACTCAAAGTCCACGTGGGCCTGAAAGAGCTGAGCCACGGTGTGTTCGCCGAGCGCTACTCACGCGAGGTCTTCGAAAGAACCAAGCAGCTCCTTTTCCAAGGGGCTCGGGCCTATAGAGATCACATATCGAGCGAAGATTGTTCCGTGAACCACCTGCAGGAGTCACTGAAGTCTGGTGTGGTAGGAGCCCCTCAACCTGCGAGGGGACAGATGTTGATTGGACCTGATGGCCGACTGACACGGTGCCAAGCTCAGGCCTCAGAAGGTGGCCTTCCCAGGACAGCGCCCATCGCTTGTTCATCGTGCATGAGATCTGTGGATGGGAAGGCGGTCTGCAGCCAGTGCGAGCGGGCCCTGTGTGGGCAGTGTGTATACACCTGCTGGGGCTGCGGTGCTTTGGCCTGTGTGCTGTGTGGCCTTGCAGACTATGCCGACGATGGTGAGAAGACACTGTGCACCAGCTGTGCTATGTTTGAAGCCTGAGGTGGCCACAGACAGCACAAGATGTTCACACTAAAGAGAGAGAAGGTGGCTTTTTATATGTTATGTTTTATACCCAGTAACAAGTGAATAAACCTCTTTATATTTGCACAAGGAC