Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Snx18
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name sorting nexin 18
Also known as Snag1
Coordinate chr2:45454782-45480798
Strand -
Gene summary Predicted to enable phosphatidylinositol-4,5-bisphosphate binding activity. Predicted to be involved in several processes, including cytoskeleton-dependent cytokinesis; endosomal transport; and positive regulation of GTPase activity. Predicted to be located in several cellular components, including extracellular exosome; growth cone; and neuronal cell body. Predicted to be extrinsic component of cytoplasmic side of plasma membrane. Predicted to colocalize with clathrin-coated vesicle. Orthologous to human SNX18 (sorting nexin 18). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Snx18

Retroname Coord Strand Genomic Region ENSG
Snx18P1 chr1:171249811-171253244 + Intergenic
N/A UCSC
Snx18P2 chr5:161402492-161405925 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001107652.1
TGCAGTCGCTGCGGTGAGCAGAGCGGATCTGCACGGAGGCTACGAGCGGAACGGGGAGCAGACCGTGCGTTGCCCTCAAGGCTCGCTCCCTTCGGCGCTCAGGGGCGCGGGTACTGACCGCGGGGCCCTCGGACCGGCCCGGGCTCGGGGCGCCAGGCTCGAGACCATGGCGCTACGCGCCCGGGCGCTCTACGACTTTAGGTCCGAGAACCCCGGTGAGATCTCCCTGCGGGAGCACGAGGTGTTGAGCTTGTGCAGCGAGCAGGACATCGAGGGCTGGCTTGAAGGGATCAACAGCCGCGGCGACCGCGGCCTCTTCCCGGCTTCGTACGTGCAGGTTATCCGTGCGCCGGAGCCTGGCCCTCCGGCCGACGGCGGCCCAGGAGCTCCGGCCCGCTACGCCAACGTGCCGCCCGGCGGCTTCGAgcctctgccagccgcgccgcccgctgccttccagccgctgctgcagccgcaggcgtcgccCGGTTCCTTCCAGTCGCCGGGCGCCGGCTTTACCTACGGCGGGGGCGCCCCGCAGCCGTCGCCCCAGCAGCTCTACGGTGCTTACCAGGCCAGCCTAGGCAGCGACGATGACTGGGACGACGAGTGGGACGACAGCTCCACAGTGGCAGACGAGCCAGGCGCGTTGGGCAGCGGTGCGTACCCGGACCTCGACGGTTCGTCCTCAGCGGGCGGCGGCGCGGCCGGCCGCTACCGCTTGTCCACACGCTCGGACCTGTCGCTGGGCTCCCGTGGCGTCTCAGCGCCCCCGCCGCATCAAGCGTCTGGAGCCAAGAGCTCCGCCACGGTGAGCCGCAACCTCAATCGGTTCTCCACCTTCGTCAAGTCGGGCGGGGAGGCGTTCGTGCTGGGAGAGGCGTCAGGCTTCGTGAAGGATGGGGACAAGCTGTGCGTGGTGCTGGGTCCCTACGGCCCCGAGTGGCAGGAGAACCCCTACCCCTTCCAGTGCACCATCGACGATCCCACCAAGCAGACCAAGTTCAAGGGTATGAAGAGCTACATCTCTTACAAGCTGGTGCCCACGCATACCCAGGTGCCCGTGCACAGGCGCTATAAGCACTTCGACTGGCTGTATGCGCGCCTGGCGGAGAAATTCCCGGTCATCTCGGTGCCCCATCTGCCCGAGAAGCAGGCCACCGGGCGCTTCGAGGAGGACTTCATCTCCAAGCGCAGGAAGGGTCTGATCTGGTGGATGAACCACATGGCCAGTCACCCAGTGCTGGCCCAGTGCGACGTCTTCCAGCATTTCCTGACCTGCCCCAGCAGCACTGATGAGAAGGCCTGGAAACAGGGTAAGCGGAAGGCTGAGAAGGATGAGATGGTGGGCGCCAACTTCTTCCTCACTCTGAGCACACCACCTGCGGCCGCCCTGGACCTGCAGGAGGTGGAAAGCAAGATCGATGGCTTCAAATGCTTCACCAAGAAGATGGATGACAGCGCGTTGCAGCTCAACCACACTGCCAACGAGTTTGCGCGCAAGCAGGTGACTGGCTTCAAGAAGGAGTATCAGAAGGTGGGCCAGTCCTTTCGGGGCCTCAGCCAAGCCTTTGAGCTGGATCAGCAGGCCTTCTCCGTGGGTCTGAATCAGGCCATTGCCTTCACCGGAGACGCCTATGATGCCATCGGTGAACTCTTCGCTGAGCAGCCCAGGCAGGACCTGGACCCAGTCATGGACCTGTTAGCACTGTATCAGGGGCACCTGGCCAACTTCCCAGACATCATCCATGTTCAGAAAGGAGCTCTTACCAAAGTAAAGGAGAGTAGACGACACGTGGAAGAAGGGAAGATGGAGGTCCAAAAGGCCGACGGCATTCAAGACCGCTGTAACACTATTTCCTTCGCCACGTTGGCCGAGATTCATCACTTCCATCAAATTAGAGTAAGAGACTTTAAATCACAGATGCAGCATTTTTTACAACAACAAATAATATTTTTCCAAAAAGTGACACAGAAGTTGGAAGAAGCTCTTCATAAATATGACAGCGTCTGATGGCTGCACATGGGACGCACATCTGTTTTCAGTTCAAGGATAATTTCTACAGCAGAGCAGAAACTGCTTTCTAAGAGCTATTGCCAACTATAGGCGGTGGTACCAGGACGGTTTTGTGTTCAACTGAAACCCGGCTGGATATATAATTACGTAGGAGAGAAGCAGTTAATATGGTTATGTAGCAGAAACAGTACCACACTTTGTAACTAAATTATACTATGTATGCCCACACTACTATTGTAACTTTTGATAATGATTATACTATTTGCCTTATTGCTTTTGAAGTATGGGTATATTAGTGTGTACTTTGTAGACCTCAAAGCCCATGAAGAGTCTCAAAGAAGCTGGCTGGATGAAGCCTGCTGAGGATGCCTTTTTAGTCTCATAGATCGAGATGACCTAAACTCAACCTACTCTGTTTACAAACTCCAACTAGAGCAGCTCTGCGACTTTGTGCCTTCAGACCGGTTGTTTTCCTTTCTGTCCCACCTGTGTTTGAGCCCCAACTTCTGATGGAAGGAGCGAAAGGCGAGCACTGGTGACAGCCGATGAAAACCTCCCATTTCTGGGTCAGTGGTAGAACCAGTGGCCATCACTTTGCACAGGAAGCATCGCCTGGTAAGATGCTGGCAGTGACAGAGGCATGAGACGCTCGCTCTGCTGTCTCTGGATGTGAAGTCTCGTAGGGGAAAAGGCTGTGCACCGTATTCCCTTACAGCTGTTTGTAGCACACGGCCTCGACTCCAGGGTCACACAGACTGGGCCTGGGGATTTCAGCAATGCCCTTAGCACGTGGGGAAGAATCCAATCGGGGATAAAGTGTAGAAGCAGTGGGTGAAAATGCACTCCGTCTTAGTTTGGGGAAGTGTCTCctgtcttttttctttttttctttctttctctcttttttAGCTTGAAATTTCCTTTTAATGTTCAGCTTTCTGTTTTGATTTCAAATGGATCTACACTGTTAACTGAATGATGAGACTCCACTGTGATTCACTCGTTTACTTAATCAAAAAATTTCAGGGATGTCTGTAAATTTCAGTGTTGTGCACAACAAGAAGTGCTGTTGGTTGATTTAAGGAGGGACCAGAAATAATTTCTACTATTCCAGTAATGAAGGAAAAAAAATACTGATTTATACTGTTTTTAAAAACTAAATATTAATAAAGCCCCCTGTCAGAAATTTAACCTTAAAAATTATTTTAAATATCATCCTATATTATTAGAAGGGAACTACAAGTGACTGATAAATACCAAAAAGATTCACAAGCAGCTTCATTTAAAAAGCACAAAGAGGTTCTGGTGTGAAATGCCCAAATCTCAAATGTTTTCTGTAGTTCTGAGTTTACAGATGTAAAAGCTGTCCCTGAAGGCTGCAGTACCTGTATCTGCTGTCCCTGTGAACTACACTCGCACCACCCCAGAAACCCTGGTACTGATAGGGTAGCGTGGGGGTACAGTCTCAGAGGGGGTGAGCCACAGTCACCCAACGGGGTCAGCTTGCAGAAAGACCAAAACAGGAAAGGCGAGTGGGATAATTACTTAACAGCACATTCACTCTCTACGAAGTAATCACATATGGGTTGAAATTTGAAGAGCAGATTGTGATCATTTTGACCTCTGGTCAAATCCTTGTACTTGAGAACTTTGAGGCGGACGTGGCATCACGTGGCGTTGCCTTTACTACAGGCCCGTGGGACTGTTGCCAAAAGTCGTGTTCTCTGAAAAAAGCAGTCCCTCTCGTTGACTGCAAAGTACAGTTAGGTAAAGAAAACCCATATATATTTAAAAACTAATTTTATTCCAGAATTTTGGACGTTATAAGTTTGAATTGTCACTGAAGAAGCAAGCTCTTCCTCGTTTCAAATGATTTGGTCACATTTATTTGCCTCTTCGTTTTGATGGTGGTTTGATTCTTTTTTCTCCTAATGAAGTTAGTAAACTTGTGCAGTAGTAACAAGGACATTACCTGAGGTGTCTTGTATGATTGTGGTTTAGCCAGGGTGGACACAGCTTAAATCACAAACTAAAGATCAAAGTACAAAGACGTGTGCAGTCTACGCTGCCTCCTCCCGAGATAACTTTCCTCCCTCCTAACCTCGTAGCATAATGCCACCAATTCATGGGGCTGTAAATGAATTCTGTGGGTTAATGCACCAGACTTACCAGTGTCCATTTTCATCCAAGATTCTTACTCTCTAACGTTCTTGGTCCTATTGAAACATTTCAGTATCTAAACATACTGCAATGTTAATACCCAAGAGAAAAGCCATTACGTGTATGCTGGTCACATGATCAGTGTGGTACAgttttgttactgttgttgttttgtttcgtcgtttctgtttttTAAATAAACTATCATGCCCTTCAA