Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Smtnl1
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name smoothelin-like 1
Also known as RGD1311701
Coordinate chr3:72207150-72219209
Strand -
Gene summary Predicted to enable several functions, including calmodulin binding activity; protein domain specific binding activity; and protein phosphatase 1 binding activity. Predicted to be involved in actin cytoskeleton organization; negative regulation of transcription, DNA-templated; and positive regulation of vasoconstriction. Predicted to act upstream of or within several processes, including peptidyl-serine phosphorylation; response to activity; and vasoconstriction. Predicted to be located in contractile fiber and nucleus. Predicted to be part of filamentous actin. Predicted to be active in I band; M band; and microtubule organizing center. Orthologous to human SMTNL1 (smoothelin like 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Smtnl1

Retroname Coord Strand Genomic Region ENSG
Smtnl1P1 chr9:88804622-88804943 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001191739.1
ATGGAACAGACAGAAGGGAACCCCTCTGAGGATGGGACCACTGTCTCCCCAACTGCAGGGAATCTTGCAACACCAGGAAGTCAAGGCACTGCAGAAGAGGTGGCCGAAGGCACTGCAGAAGAGGTGGCCGAAGGCACAGTTGGGACAAATGACAAAGAAGAGCCTCCAGATGGGGCAGAACATTTGTGTAAAGCAGCATCTGAGGGTGGTATATCAGGGGGATGCCAGGTGGAAGCAAGTATATTAGAGGAGCTCAAGACAGACTCGCAAGGGGAGGCCAGAGGGAAGGAGGAAGCCAAGGCTGACCTTGCCGAGGAGAAAGGTGGGAAGGAAGACACCACAGTGTCTTCTCAGGAAGACACTGGTAAGAAAGAAGAGACAAAACCTGAACCCAGTGAGGTTACGGAGAAAGAGGAAGCCGTGCTGCCCTTGGAGAAGCAGAAGGTTGATGAGAAAGAGACCAATCTAGAATCTAAGGAGAAATCAGATGTGAATGATAAGGCTGAGCCTGAATCCAAGGAGGATGCTGGAGCAGAGGTTACTGTCAAAGAGGCTGAGACTGAATCTCAAAAGAAGGCTGATGTGAAAGACCAGGCCGAGCCTCAGCTTCAGGAAGTTGATGGGAAAGAGGCCAGAAGTGACACAAAGGAGTTGGTGGAGCCAGGGAGTCCCACTGAAGAGCAGGAGGAACAAGGTAAGGAAAATGAATCAGAAGAAAGGGCAGCGGTGATTCCCAGCTCCCCCGAGGACTGGCCCGAGAGCCCCACAGATGAGGGGACCAGCCTCAGCCCAGATGGGTTGGGTCCAGAGTCTACAGCATCTGGAGAGACCAGTGCTTCAGCCAGTGAATCTTCGCCCAGTGAGGTGCCAGAGAGCCCCACAGAGCCCCTTCCCTCGGAGAAAAAGAAGGAACGGGCACCAGAACGCAGGGTGTCGGCCCCCACCCGGCCCCGAGGGCCACGTGCACAGAATCGGAAGGCCATCATGGACAAATTTGGCGGGGCAGCCTCTGGCCCCACTGCACTGTTCCGGAACACAAAGGCAGCCGGGGCAGCCATTGGTGGTGTTAAGAACATGCTTTTGGAGTGGTGCCGGGCCATGACGAGAAACTACGAGCACGTGGACATCCAAAACTTCTCCTCCAGCTGGAGCAGCGGCATGGCCTTCTGTGCCCTCATCCACAAGTTTTTTCCAGACGCCTTTGACTATGCAGAGCTGGACCCAACAAAGCGCCGGCACAACTTCACGCTAGCTTTCTCTACTGCAGAGAAACTAGCCGACTGCGCCCAGCTGCTGGAGGTGGATGACATGGTGCGGCTGGCAGTGCCCGATTCCAAGTGTGTCTACACTTACATCCAGGAGCTATACCGTAGCCTTGTACAGAAAGGGCTGGTGAAGACGAAAAAGAAATGAATGGCAAAGCCGTGCGGGAGGAGGAAGCGGGGACTGCTGCCAACCATGGCCTCGAGGTGCTCTTATACCACCAGGCATAAAACGGGTGGCACCGGCCTCAACGACATTAAAAGTACTTCTGCAAAATTCCTCTCATTCCTTGCTGCTCCCCAAACGCATCCCAACCAGACACACATACGTACTAGGCGATGGCCAAAAATAAAAGAAACCTGCATTCGCAGCC