Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Crat
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name carnitine O-acetyltransferase
Also known as -
Coordinate chr3:8967984-8981959
Strand -
Gene summary Enables carnitine O-acetyltransferase activity. Involved in fatty acid metabolic process. Predicted to be located in mitochondrion. Predicted to be active in peroxisome. Human ortholog(s) of this gene implicated in neurodegeneration with brain iron accumulation. Orthologous to human CRAT (carnitine O-acetyltransferase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Crat

Retroname Coord Strand Genomic Region ENSG
CratP1 chr5:71542868-71543811 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001004085.2
CTGCGACCCATCAAAGCTCCGCCCCGTGAGTCCTGCCTGACCGGCAGCCCGCCGGGCCCGGTGGCCGCGGGGCCGCCTCTACTGGCTAACGGCAGTGACTCGGCGACCTTGAACCTAGAGCCCTAACCGCGAACCCACTGACCCCAGCACCCCAGCAGTGGCGCAGAGTTTACCCAGCGTGAGGGGCGGAGCGGACCCAGTGTCCGCAAACAGATTGGGACAATGTTAGCTTTTGCTGCCAGAACCGTGGTGAAACCCCTGGGCCTCCTCAAGCCCTCCTCCTTGATGAAGGTGTCTGGTCGATTTAAGGCCCACCAGGATGCACTGCCACGGCTGCCTGTGCCTCCACTTCAGCAATCCCTGGACCATTACCTCAAGGCACTGCAGCCCATCGTGAGTGAGGAAGAATGGGCTCACACCAAGCAACTGGTGGACGAGTTTCAGACCTCAGGGGGTGTAGGGGAACGCCTGCAGAAGGGATTGGAGCGCAGGGCCAAGAAAATGGAGAACTGGCTGTCCGAGTGGTGGCTCAAGACAGCCTATCTCCAGTTCCGCCAGCCTGTGGTCATCTACTCCAGTCCAGGAGTGCTGCTGCCCAAGCAGGACTTCATGGATCTACAGGGTCAGCTCCGGTTTGCTGCCAAACTCATCGAGGGTGTATTGGATTTCAAGTCCATGATTGACAACGAGACGCTGCCAGTTGAGTTCCTGGGAGGACAGCCACTGTGCATGAACCAGTATTATCAGATCCTGTCTTCTTGCCGTGTGCCTGGCCTCAAGCAGGACTCAGTGGTGAACTTCTTAAAGTCAAAGAAACCACCCACACATATAACCGTGGTGCATAACTACCAGTTCTTCGAGCTGGATGTGTACCACAGTGATGGGACACCACTCACCTCAGATCAGATCTTTGTGCAGCTTGAGAAAATCTGGAACTCCTCACTGCAATCCAACAAGGAGCCTGTTGGCATCCTAACCTCCAACCACCGGAACAGCTGGGCCAAGGCCTACAGCAGCCTCATTAAAGACAAAGTAAACCGGGAGTCGGTGAACTCCATCCAGAAGAGCATCTTCACTGTGTGCCTGGACAAGCAAGTGCCCAGAGTCTCAGATGATGTCTACCGCAGCCACGTAGCCGGCCAGATGCTTCATGGTGGTGGCAGCAAGTTCAACAGTGGCAACCGCTGGTTCGACAAGACACTGCAGTTTATTGTGGCAGAAGATGGCTCCTGTGGGATGGTTTATGAACATGCAGCTGCAGAAGGGCCCCCCATTGTCGCTCTTGTGGACCATGTCATGGAGTATACAAAGAAGCCTGAACTTGTGCGGTCCCCTATGGTACCCCTGCCTATGCCCAAGAAGCTGCGGTTCAACATCACACCTGAGATCAAGAATGACATAGAGAAGGCCAAACAGAACATCAGCATCATGATCCAGGACCTGGACATCATGATGCTGGTTTTCCATCACTTTGGAAAGGACTTCCCCAAGTCCCAGAAGCTAAGCCCTGATGCCTTCATCCAGATAGCCCTGCAGCTGGCATACTACAGGATCTATGGGCAGGCGTGTGCCACGTATGAAAGCGCCTCTCTGCGCATGTTTCACCTGGGCCGCACTGACACCATCCGCTCCGCCTCCACAGACTCGCTGGCCTTTGTCAAAGGCATGGATGACCCCAAAGTGCCGGAGCAGCAGAGGGTGGAGCTGCTTCGAAAGGCTGTGCAGGCCCACCGAGCCTACACCGACCGCGCCATCCGAGGGGAGGCCTTTGACCGGCACTTGCTGGGTCTGAAGCTACAGGCCATCGAGGACCTGGTGAGCATGCCTGACATCTTCATGGATACCTCCTACGCCATTGCCATGCACTTCAACCTTTCTACCAGCCAGGTCCCTGCCAAGACAGACTGTGTCATGTCCTTCGGACCTGTGGTCCCAGACGGTTACGGCATCTGCTACAATCCCATGGAGGCCCATATCAACTTTTCCGTGTCAGCCTACAACAGCTGTGCTGAGACCAACGCTGCCCGCATGGCTCACTACTTGGAGAAAGCTCTGCTGGACATGCGCACCTTACTCCAGAACCACcccagggccaagctctgaacccaggcccaggccTGCCCGTTCCACAGCCAAGCCCACTTTGGAATGGACTCCTGCCATGGCTCGCACTCCCTTGGCTCCCGTGCCCTCCAGGCTGACTGAGCCAGATAAGCATTCTCTAGCAGGGCCCCGAGGTCCAAGCCAAGTGCCTTCCAGGCCTTGTCCTCAGCACCTGCTGTAGTATGTATAGGGCTGAGCCCAGAGGCTGAACAAGACTAAGGCCCGGGTCCCCAGCATATCATCCATCGATGTGAATCATGGGGAAGGGAACCCGTCCAGCCCACCCCTCCTCAGCAGGAGCTGTGAAGAGTCCCTTTCCTCCGCCCTGGCCAGTCTCTTTCATCTCCACAGCCAAGCCAGAATCTGTCTTCATGAGGAAATACCCAGGGACCAGGAGTCAGAGGACTATCTATCGATGAGGGGCCTCAGCCTCTCCATAGTAAGGGTTAAGGGACACCTGAGGCCTAGCCTCCACCCTGCACCTCGAGGTGCCATCTCCCAGCTGCCACTCTCTGGTGACTCTTGAGCCCCAGACTTCCTGCTTCCATTCAGTGTGGTTCTTGCTGCAGTCATGGTTGCATAATGTGATTCTGCCAGGCGATCAATAAAGGGAAGAGTGCTGGTGAA