Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Tmem106b
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name transmembrane protein 106B
Also known as LRRGT00101
Coordinate chr4:39517679-39534491
Strand +
Gene summary Predicted to enable ATPase binding activity. Predicted to be involved in several processes, including dendrite morphogenesis; lysosome localization; and lysosome organization. Predicted to act upstream of or within several processes, including lysosomal lumen acidification; lysosomal protein catabolic process; and positive regulation of dendrite development. Predicted to be located in endosome and lysosome. Predicted to be active in lysosomal membrane. Human ortholog(s) of this gene implicated in hypomyelinating leukodystrophy. Orthologous to human TMEM106B (transmembrane protein 106B). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tmem106b

Retroname Coord Strand Genomic Region ENSG
Tmem106bP1 chr4:156318479-156319488 + Intergenic
 N/A UCSC
Tmem106bP2 chrY:1567439-1567730 - Intergenic
 N/A UCSC
Tmem106bP3 chrY:2812150-2812937 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001004267.1
CGCAGCACTCCGCGTGCGGAGCATCTGAGAACCGTGTTGAGTTCACAGGACCGCGACATAAACATTGAGAGCCTGGGGAGGAAACGAAGGGGATCTAGCATTCCTTTTAAAAACCTCAAACATGGGAAAGTCTCTTTCTCATTTACCTTTGCATTCCAATAAAGAAGATGGCTATGATGGGGTCACATCAACAGACAATATGAGGAATGGATTGGTTAGCAGTGAGGTGCGTAACGAAGACGGAAGAAGTGGAGACGTCTCTCAGTTTCCATACGTGGAGTTTACTGGAAGAGATAGTGTCACTTGTCCCACTTGTCAAGGGACAGGAAGAATCCCTAGGGGGCAAGAAAACCAACTGGTGGCATTGATTCCATATAGTGATCAACGGTTACGACCAAGAAGAACAAAGCTGTATGTGATGGCATCTGTGTTTGTCTGCCTGCTCCTGTCTGGATTGGCTGTGTTTTTTCTTTTCCCTCGATCTATTGACGTGAAGTACATTGGTGTAAAATCAGCCTATGTTAGTTACGACTCTCAAAAGCGAATGATATATTTAAACATCACGAACACACTAAATATAACAAATAATAACTATTATTCTGTTGAAGTTGAAAACATCACTGCTCAAGTTCAGTTTTCAAAAACAGTGATTGGGAAGGCACGGTTAAGCAACATAACTAACATTGGCCCACTTGATATGAAGCAGATTGATTATACGGTACCCACAGTTATTGCCGAGGAAATGAGCTACATGTATGATTTCTGTACACTGCCCTCCATCAAAGTACACAACATAGTACTCATGATGCAAGTTACTGTAACAACAGCATACTTTGGACACTCTGAGCAGATATCTCAGGAGAGGTACCAGTATGTTGACTGTGGAAGGAACACGACTTACCAGTTGGCCCAGTCTGAGTATCTAAATGTCCTTCAGCCACAACAATAAACTCTAAAGGAGATGTGGTTAGACCCAGCACCACACCTGAGACATGGTCAGAGCTGTCAGTGAGGAGGTACTGCCTCTAAGGACATCTTTAATTGAGCATGTCTAAAGTTTACACTGGGATGTTGGCGATCCAGCTAACAGAATTTGGTCCTTATGCAGTTCCTGGACTCTGTTTTCTGTGTTGACGATTTGCTCCCACCACGAGCTTTTCCTCCATCCAATGTTAACTGATTGGCTTTCTTCTCACCTTTGTTCCCAAGGTGAAAAATTGAGACTTCCTTAGAATACAATAAATGATTATATAAAAGTCATAGATTTAATCTATATATCTATTGATAATATAGTTCAATCCTGAACATAATTTGAAAAATAACTTCTGAAGATTTTTATATATTACTGAAAGCCTATTATTCATGGAGAACTTTTAAAAACTGACCTGTTTTATAAATTCCCATTCTTACATAGTAAACTTTCAACTATATGAATAACTTAGCTATTAGCTAAATGTTTTTAGCCTTTAATTTCTTCAAATTCTACAGGTTTGCATGTTTCGTCTTATTTCTAGCTAATGGTTGCATAATATTCACCAACCATAACAGTCTGCCAAATTCTGTCCTACATTTTATAAGAACCTCTCAGTATGTGTTTCATGTATAGCTTTGTGAACTTCCTGTGTGATCTTCAAACACTTTAATGTACAATATTGTAAATAAACTGCATGGCTTTTATACAGCTTTGATAAATGTCAAATGAAGTGGTACAGATTAAGAAGTAAAGCAAGTTGCTCATAAAAAATAAAGTAGGAAAATGAAATTCAGAAACCTATGAAGTATCAGTAGGTTCCAGCTACATGTTGGATCTGGCATAAAATAGATGCACAATAAAACACTTTGCTGCTCTCTCTA