Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Xpc
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name XPC complex subunit, DNA damage recognition and repair factor
Also known as -
Coordinate chr4:123134457-123161985
Strand -
Gene summary Predicted to enable DNA binding activity; RNA polymerase II-specific DNA-binding transcription factor binding activity; and transcription coactivator activity. Involved in response to auditory stimulus and response to xenobiotic stimulus. Located in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in pancreatic cancer; serous cystadenocarcinoma; xeroderma pigmentosum; and xeroderma pigmentosum group C. Orthologous to human XPC (XPC complex subunit, DNA damage recognition and repair factor). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Xpc

Retroname Coord Strand Genomic Region ENSG
XpcP1 chrX:149279840-149281182 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001107874.1
GGCACGCGGAGACTTTCGGCAGTCCTGCGTGGTTGTCCGGAGGAACGCCTCTGGCTAGCATGGCCCGAAAGCGTACCGCAGGCGGAAAGCGGAGGAAGCGCGGCCAGGAAGCCGAGGACAACAAAGCAACCCGGCCTGAGGAGAGCGATGCGGACGACTTTGAAGATGAGAAACAGAAACCCCCAAGGAAGTGCTTTCTCCCGAAAGTTTCCCAAGGAAAGAGGAAGAGAGACTGCAGTGATCCAGGGGACCCCACAAATGGTGCAGCAAAAAAGAAAGTGGCCAAAGCCACCACTAAGTCCAAGAATCTCAAGGCTGTGAAGGAGGAAGCACTCAGCGACGACGGGGATGATTTCCGGGACTCATTGAGTAACTGCAGAAAGGCAAAGAAACATCCCAAAAGAGAGGTGGTGGACCAAGGCACCGATGAAGATGACAGCGAGGATGACTGGGAGGAGGTGGAAGAACTTACTGAGCCTGTGCTGGACATGGGAGAAAATTCTGCTACCTCGCGGTCTGACCTGCCTGTGAAGGCAGTGGAGATAGAAATTGAAACACCAGAGCAGGCGAAGGCACGGGAAAGAAGTGAGAAGATAAAGATGGAGTTTGAGACATACCTGCGGAGGATGATGAAGCGTTTCAATAAGGAAGTGCAGGAGAACATGCACAAGGTTCACTTGCTGTGCCTGCTGGCCAGTGGCTTCTATCGAAATAGCATCTGCCAGCAGCCAGATCTGCTGGCCATCGGCCTCTCCATCATCCCTATTCGCTTTACCAAAGTGCCACTTCAAGACCGGGATGTCTACTACCTTTCAAACCTGGTAAAGTGGTTCATTGGAACCTTCACTGTCAATGCTGACCTTTCAGCCAGTGAGCAGGACAGCCTGCAGACGACCTTGGAAAGGAGGATCGCCATTTACTCTGCGAGGGATAATGAAGAGTTGGTCCATATATTTCTTCTGATTCTTCGGGCTCTGCAGCTGCTCACCCGGCTGGTCTTGTCTCTGCAGCCCATTCCACTGAAGTCAGCTGTGGCAAAGGGGAAGAAATCTTCCAAGGAGACATCTTTAGAGGGTCCTGGAGACTCTTCAGAACCTTCTAGTAACATTCCAGAAAGCCACAACAAACCCAAGACCAGCAAAAGAATCAAACAAGAAGAAACCTTGTCTGAAGGCAGTGGCAAGGCAAATGCCAGAGGAAAGAGAGGCACTGCCACCGCTGGCAGCAGGCAGCAGAGGAAGCCCTCCTGCAGCGAGGGAGAGGAGGCCAAGCAGGAAATCCAGAGCCATCCACAGGCCCAGAAGCGGCGTGTGGCTGCCAAGGTGTCTTACAAAGAGGAGAGTGAGAGTGATGGGGCAGGCAGTGGCTCTGACTTTGAACTGTCCAGTGGGGAGGGCCAGCATTCCTCTGATGAGGATTGTAAGCCTGGCCCTCGAAAGCAGAAGAGGGCCTCAGCTCCTCAGAGGTCAAAGGCTGGTTCTAAGAGTGCTTCCAAGACCCAAAGTGGGAGCCAATGGGAGCCACCAAGCTTTTCAGTGGCATCTTCAAGCTCTTCAGCCTGCAAGCGAGGCAAGAAGATTTCCTGTGGTGGTGAAGAGACAGATGATAGGAAAGCTGCTGGTGTAGACCAGTGGCTCGAGGTGTTCTGTGAGCCACAGGCAAAGTGGGTGTGTGTGGACTGTGTGCATGGTGTGGTGGGCCAGCCTGTGGCCTGTTACAAATATGCCACCAAACCCATGACCTATGTTGTAGGCATTGACAGTGATGGCTGGGTCCGAGATGTCACTCAGAGGTATGACCCAGCCTGGATGACAGCAACCCGCAAGTGCCGGGTTGACGCTGAGTGGTGGGCTGAGACTTTGAGGCCCTATCGGAGCCCACTTACCGAGAGGGAGAAGAAGGAAGACCAGGAGTTTCAGGCAAAGCACCTGGACCAGCCTTTGCCCACCTCCATCAGCACATACAAGAACCACCCTCTGTATGCCCTGAAGCGCCACCTCTTGAAATTCCAGGCTATTTACCCTGAGTCAGCTGCGGTCCTTGGGTATTGTCGTGGAGAAGCTGTCTATTCCAGGGATTGTGTGCATACCTTGCACTCCAGGGACACGTGGCTGAAGCAAGCAAGAGTGGTGCGGCTTGGAGAAGTGCCCTATAAGATGGTGAAAGGTTTCTCTAACCGTGCCCGGAAAGCCCGGCTTTCGGAGCCCCAGCTGCATGACCACAATGACTTGGGCCTCTTTGGTCACTGGCAGACAGAAGAGTATCAACCTCCTGTGGCTGTAGACGGGAAGGTGCCCCGGAATGAGTTTGGGAACGTGTACCTCTTCCTGCCCAGCATGATGCCTATCGGCTGTGTCCAGATGAACCTACCCAACCTGCACCGCGTGGCCCGCAAGCTGGGCATCGACTGCGTGCAGGCCATCACTGGCTTCGATTTCCATGGAGGCTATTGCCACCCAGTAACTGATGGCTACGTTGTCTGTGAGGAATTCAGAGATGTGCTGCTGGCTGCTTGGGAGAATGAACAGGCCCTCATTGAAAAGAAGGAAAAGGAGAAAAAGGAAAAGCGGGCACTGGGGAACTGGAAGCTGCTGGTCAGAGGACTGCTCATCAGAGAAAGGCTGAAACTCCGCTACGGGGCCAAGAGTGAGGCAGCAGCTCCCCATGCAAATGCAGGAGGCGGACTCTCTTCTGATGAAGAGGAAGGGACCAGTTCACAAGCAGAAGCTGCCAGAGTTCTGGCTGCTTCCTGGCCACAGAACCGAGAGACTAAAGAAGAACAGAAGCCCGACTACACGAAGATGACTCGGAGAAGGCGGGCAGCAGAGGCTTCCCATCTCTTCCCATTTGAGAAGCTATGAAGCCAGTGTCCTCGAGGCCAGAGAAGGCAGATAGCTGATGGGCCTGGGGACTAGGAAGTTGTGCTGCAGATCAGTCTGACACCAGCCCAGCTGGATCCCCATAGGGTGGTGCGGTAAGCTGCCCAGAGTCTACTCTGGTGTTTGGAACACTTTACTGGGAGATACCCTCTGACCCCTGGACCTTGGTATTCCTGTCTTTGGAAATGGGAGTGAGttttagagggtcttatttgttttcccagctggtgtcaaatttaaaatccctgtcttatagtgagggctgagattatatgcatataccaccatgccTTATCTACCCTTTATTTCTGTTTTTTTAAATAGAAGTCACTGGGAAATTATGGGTATTGGAGCAATGAGAGGAATCCTCCTTTAGTGCAGTTCACATGTAGAATGCTTGCTCTCCTCTCTCCTTCAGACCCAGGGCATTTGCTTTTCAGGCCTGCCTTCCTGAGTCAGGTTTCCTGTACTGCCTGCTGCTCTTTTGTCAGAGAACACAGGTCATCTCTTGTCAAGGCACTTTTGGGATTTTATACTGACAGAAGACTAGAACAAAGCTAAAAATCAAGAATGAAAAAAAGAAAACAAATAGAGAATTATGAAAATGTTCATAAAAGATTATTAGTTTTTGGCTACATTTTATTCAATTCTGGATACATTTACTTTGTACTGGTGATACATTTTCTAAGCTGCTGTATGTACTACTCAGGAAAGAGTCCTTTTATAGAACCTACAGGAAATAAAGAATTTACCT