Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Snrnp40
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name small nuclear ribonucleoprotein U5 subunit 40
Also known as RGD1309198
Coordinate chr5:148577498-148610658
Strand +
Gene summary Predicted to be located in cytosol and nuclear speck. Predicted to be part of U2-type catalytic step 2 spliceosome. Orthologous to human SNRNP40 (small nuclear ribonucleoprotein U5 subunit 40). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Snrnp40

Retroname Coord Strand Genomic Region ENSG
Snrnp40P1 chr8:3519316-3520192 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001134556.1
GCGCGGTTACTGGCGGCGCCGAGGGTAGTGGTTGCCGCCATGATCGAGCAGCAGAAACGCAAGGGCCCAGAGCTACCCCTGGTTCCCGTCAAGCGGCCGCGACATGAGTTGCTGTTGGGAGCCGCAGGATCCGGCCCCGGAGCCGGGCAACAGCAGGCGACTCCGGGGGCATTGCTGCAGACGGGACCGCCAAGGTGTTCGTCCCTTCAAGCCCCCATCATGCTGCTCTCAGGACACGAAGGGGAAGTGTATTGCTGCAAGTTTCACCCCAATGGATCTACCCTGGCTTCTGCAGGATTTGACCGACTCATACTACTGTGGAGCGTCTATGGAGACTGTGACAACTATGCTACGTTGAAGGGACACAGCGGAGCAGTAATGGAGCTGCACTACAACACAGACGGCAGCATGCTCTTCTCAGCATCAACAGATAAAACTGTGGCAGTGTGGGATAGTGAAACAGGAGAGAGAGTTAAAAGGCTAAAAGGGCATACTTCCTTTGTGAACTCCTGTTATCCAGCCAGGCGGGGGCCCCAGCTTGTCTGCACAGGCAGCGACGATGGCACAGTTAAGCTTTGGGACATCCGGAAGAAAGCAGCCATCCAGACATTTCAGAACACATACCAGGTGTTAGCCGTCACCTTCAATGACACGAGCGATCAGATCATCTCTGGCGGAATAGACAATGACATCAAGGTTTGGGACCTACGCCAAAACAAGTTAACCTACACCATGAGAGGCCATGCCGACTCTGTAACTGGCTTGAGCTTGAGTTCTGAAGGATCTTATCTCTTGTCCAATGCAATGGACAACACAGTGCGTGTCTGGGATGTCCGGCCATTTGCTCCCAAAGAGAGATGTGTGAAGATATTTCAAGGAAATGTCCACAACTTTGAAAAGAACCTCCTGAGGTGTTCCTGGTCACCAGACGGAAGCAAGATAGCAGCTGGCTCAGCAGACAGGTTTGTGTACGTGTGGGACACCACAAGCAGAAGGATCCTGTATAAGCTTCCTGGTCATGCTGGCTCCATCAATGAGGTGGCCTTCCATCCCGATGAGCCCATCATCCTCTCAGCATCCAGTGACAAGAGGCTGTACATGGGTGAGATCCAGTGAAAATGTGGAATGGAAGGCCCCGTGACCCGAGGCTCAGACTACGCCATTGGCCAGAGTCAGATGGTGTCTGGGCTGACCTGCCTTCAGATGACCATCGTTAGCAAGCAGCTGGACCTGATGGCCATATTCCAGCAACCTCTTGTACCCCATTTACCAGAACCACTGTGGCCTCTGGTACCACCCGCCAGATTCAGGGATTGGTTTCTTCTCTTTAAAAATAAGATTTCTTCAGAAAGACAAACGTTGGTTTGATATTTCCTGTTTTTAATCTAGGCTGGAGACAGGGAGTGGCAATTTGAAATTTGTTAGTTGCATTTATTTTTGTTTTATTTTTAAATTGAATAACTAGCTTGTATGATATTTGTTTCTGTGTTTGAGTCATTTTGTATTAAAAATCCAAACAGATACCTTTTTACAAGAACCTTGTGGCTTGG