Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Galnt12
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name polypeptide N-acetylgalactosaminyltransferase 12
Also known as RGD1562001
Coordinate chr5:62718733-62751345
Strand +
Gene summary Predicted to enable carbohydrate binding activity; metal ion binding activity; and polypeptide N-acetylgalactosaminyltransferase activity. Predicted to be involved in protein glycosylation. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Human ortholog(s) of this gene implicated in colorectal cancer. Orthologous to human GALNT12 (polypeptide N-acetylgalactosaminyltransferase 12). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Galnt12

Retroname Coord Strand Genomic Region ENSG
Galnt12P1 chr15:5036960-5039340 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_232988.9
CCGGGATCCGGGTCCAGCCTCGGCCCGAGGCCGCGGGGCGCAGCTAGAGGGTGCATGTGGGGGCGTGCGGTGAGGAGGCGCTGCCCGCGGGGGCTGCGGCGCGGCCGGGAGGCGTTGCTGGCACTGCTGGCCCTGGCTGGGCTGGGCGCCGTGCTGCGGGCTCGAAGTAGGTCGGGGACGGTGGACCCGGTACCCACTCGGACTCCTCACCCCGGGCGTCACGAGCCGGTGCTGCCCAGGCCTCCGCTGCCCGCCGATGCTCTGGGAGCGAAGGGGGAGGCCGTGCGGCTGCAGCTGCAGGGCGAGGAGCTGCGGCTGCAGGAGGAGAGTGTGCAGCGGCACCAGATCAACATCTATCTGAGCGACCGAATCTCGCTGCACCGCCGCCTGCCCGAGCGCTGGAACCCTCTGTGCAGAGAGGTGAAATATGATTATGATAACCTGCCCAAGACATCTGTTGTCATAGCATTTTATAATGAAGCCTGGTCCACACTCCTTCGGACAGTTTACAGTGTTCTCGAGACTTCCCCTGACATCCTGCTGGAGGAGGTCATTCTGGTAGATGACTACAGTGACAGAGAGCACCTGAAGGAGCCCCTGGCCAACGAGCTGTCACAGCTGCCCAAGGTGCGCCTGATCCGTGCTAGCAAGAGAGAGGGCCTGGTGCGAGCCCGGCTCCTGGGAGCCTCCGCGGCCAGGGGCGAAGTGCTGACATTTCTGGACTGTCACTGTGAATGTCATGAGGGGTGGCTGGAGCCTCTGCTGCAGAGGATCCATGAGAAGGAGTCGGCTGTGGTGTGCCCCGTTATCGATGTCATTGACTGGAACACCTTTGAGTACCTGGGCAACTCCGGAGAGCCCCAGATTGGAGGCTTTGACTGGCGGCTGGTATTCACGTGGCATGTGGTCCCCCAGCGAGAGCGGAAGTTGATGCGGTCTCCTATTGACGTTATCAGGTCTCCAACTATGGCTGGGGGACTGTTTGCTGTGAGTAAGAGATATTTTGAATATCTGGGGTCTTATGATACAGGAATGGAAGTCTGGGGAGGAGAAAACCTTGAATTCTCCTTTAGGATCTGGCAGTGCGGTGGCACTCTGGAAACACACCCTTGCTCCCACGTGGGCCACGTCTTCCCTAAGCAAGCTCCCTATTCTCGCAGCAAGGCTCTAGCCAACAGTGTCCGCGCTGCAGAAGTGTGGATGGATGACTTTAAAGAACTCTACTACCACAGAAATCCCCAGGCCCGCCTGGAACCCTTTGGGGACGTGACAGAGAGAAAGAAGCTTCGGGCCAAGCTCCAGTGTAAAGACTTCAAGTGGTTCCTGGATACAGTGTACCCAGAACTGCATGTGCCAGAGGACAGGCCTGGTTTCTTCGGGATGCTCGAGAACAGAGGACTAAGGGGGTACTGCCTGGATTATAACCCTCCCAGTGAAAACAATGTGGAAGGCCACCAGGTCCTTTTGTACCTCTGCCACGGGATGGGTCAGAACCAGTTTTTCGAGTATACATCCCGGCAAGAAATACGATATAACACCCGCCAGCCCGAGGCCTGCATAGCAGTGGAGGAAGGGAAGGACGTCCTTATCATGGATCTCTGCAAAGATACCGTTCANNNNNTNNCGGAGAATCAGGAGTTCGTCCTACAGGAGGACGGCACGTTAGTCCACAAGCAGAGCGGGAAATGTGTGGAGGCCACGGAGAAGGAGTTCGACACTTCCTTTGCTCCGCACTTGCGGGATTGTAGCAGCTCAGACAACCAGAGGTGGCTCTTCAAGGAGCGCATGTCATAGCACACCGCCTCGCCAGGGAAGGAGCCCACCGCTGCCATGGGCTGTGTGCCCGGTGAGATGGACAAAGCACATGGTTGTCATCTGTGAATGTGTTGGACTCCACAGCAATGTGAATCATCTTTGTACAGATTTGGAAAACTTTAAAAATGTCTCCCAGTGTCCCGTTTTCTAAGGGCAATCCTAAGATGTTGCCTTTGGTGTTTGGGAAACTTAATGCACGATGTGCATTTTACCCATGGTGCCTTTTATTCTTATTCGCAGAAAGGGTAAATATTTTATTTTGTTACTTACAAAGCTTCCCGGGTGTTTAGTATAATTTACACAAACTGGTAATACCTCAAATGTCGACTGGTAATACCTCAATGTCATCAAGTTAGAGTTCTCTCAGGGGGGTGAGACGGACACTAGAAATCCTGTCTTGATTTCATTTGGTGTGAGTGGGTGGGATAGTCTAGATTTATACAATAAAGAATGCTTTTTGCTTATGTGCCGATCATCAAAACTCTATCATAATGTTCATACTGACCCAAACAGGCTAACCAAATCTGAAAGCTCAAAGAAAGAATATGGTTTGCCAAGGTCCTACAGACTTGAGAGTGTGCATTTCCAGCAGTGTCTAATGGGAGGGTGTCTGGTGACTTAGGAGGACTTGACTACTGTGACTGTAAGACACATTTATATCCCTTCTAGTTTTTAATCACAGGACAGTTCCAGGGAGAAACGGAATGTTCTACATGAAACTCAACTTTTAAGTTTTTCCTTAAATAGTATTTGATGATTTAATATTATTATTTATAATAGTGTTTGATTATTGAGTTTCTGATGAAGCAGCCGCTGTGCACATTGCTGGATAATCCTGATGTCTGGGTGGCTCCAGATCAGCTCCAAGAGCTACAGTggactgaggccatgagtccctggctagagtgcctgcctaccacgcatggagccctggttaagttcccagaaccccatttacaaaaatcaacttgtcggcacacccctaatccctgcctgcactggggaagtggaggcacgagaatcactgagttatcactggctacacagagagtttgaggttaggttgggctacatgagaccctgtctcgggaagaCATCAGTCAGAAGGTAGACTGCGGATCTTACTTTTGTCCCGGTCAATTGTGAAAACACAAGTGATTGATTAAAAGCGTCACTGCA