Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Thrap3
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name thyroid hormone receptor associated protein 3
Also known as -
Coordinate chr5:144178248-144221318
Strand -
Gene summary Predicted to enable several functions, including phosphoprotein binding activity; thyroid hormone receptor binding activity; and transcription coactivator activity. Predicted to be involved in nuclear-transcribed mRNA catabolic process; positive regulation of circadian rhythm; and regulation of RNA metabolic process. Predicted to act upstream of or within circadian rhythm. Predicted to be located in nuclear speck. Predicted to be part of mediator complex. Orthologous to human THRAP3 (thyroid hormone receptor associated protein 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Thrap3

Retroname Coord Strand Genomic Region ENSG
Thrap3P2 chrX:31321916-31325415 + Intergenic
 N/A UCSC
Thrap3P1 chr10:22618602-22621228 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001009693.1
CGGGCCGGTTGTGCCGTTGCGAGACTGCAGCTGTAGTCGCTTCGGCCGGTCAAGAGTTATACCCTGACTGTAAATTGGAGAAGCCAGTAGTGCTGCTGGTGTTTTTTTGGAGACAGTTGAAGTTGAATCATTAATTCTAAGGTTTAAACTCTTCCAAGATGTCAAAAACAAACAAATCCAAGTCTGGGTCTCGCTCTTCTCGGTCAAGATCAGCATCCAGATCTCGGTCTCGTTCGTTTTCAAAGTCTCGATCCCGAAGCCGATCTGTCTCTCGTTCAAGGAAGCGCAGGCTGAGTTCTAGGTCTCGTTCCAGATCATACTCTCCAGCTCATAACAGAGAAAGGAATCACCCCAGAGTATATCAGAATCGAGATTTCCGAGGTCACAACAGAGGCTACAGAAGGCCCTATTACTTCCGTGGACGAAACCGAGGCTTTTATCCATGGGGCCAGTATAACCGAGGTGGCTATGGAAATTACCGTTCTAATTGGCAGAACTACCGGCAAGCATACAGCCCTCGTCGGGGCCGATCCCGATCTCGGTCCCCCAAGAGAAGGTCCCCTTCACCAAGGTCCAGGAGCCATTCTAGGAACTCGGATAAGTCATCCTCTGACAGGTCAAGACGTTCTTCGTCCTCCCGGTCGTCCTCCAACCACAGCAGAGTTGAATCATCTAAACGAAAGTCTACAAAAGAGAAAAAGTCCTCTTCCAAGGATAGCCGGCCATCTCAGGCAGCTGGTGATAACCAGGGAGATGAGGCTAAGGAGCAGACATTTTCTGGAGGCACCTCTCAAGATATAAAAGGGTCTGAGAGCTCAAAGCCATGGCCAGATGCTACCACCTATGGCACTGGTTCTGCATCACGGGCCTCGGTTTCTGATCTGAGTCCCCGGGAGAGAAGCCCAGCTCTCAAAAGCCCCCTCCAGTCTGTGGTGGTTAGGCGAAGGTCACCACGCCCTAGCCCTGTGCCCAAACCTAGTCCTCCTCTTTCTAATGCATCCCAGATGGGCTCATCTATGTCAGGCGGTGCTGGATATCAGTCTGGAGCACACCAAGGTCCGTTTGACCATGGCTCTGGGTCTTTGAGTCCATCCAAAAAGAGCCCTGTGGGTAAGAGTCCACCAGCCACTGGCTCTGCATATGGTTCATCTCAGAAAGAGGAGAGCGCTGCTTCGGGAGGAGCAGCCTACACAAAAAGGTATCTGgaagagcagaagacggagaatgggaaggataaggagcagaaacaaacaaatactgataaagagaagctgaaggagaaAGGGGGCTTCTCTGATGCTGATGTCAAAATGAAATCTGATCCATTTGCTCCCAAGACGGACACTGAGAAGCCCTTCCGAGGCAGCCAGTCACCCAAAAGGTATAAGCTCCGGGATGACTTTGAGAAAAAGATGGCTGACTTCCACAAGGAGGAGATGGATGAACAAGATAAGGACAAATGTAAGGGAAGGAAGGAACCTGAGTTTGATGATGAGCCCAAATTTATATCTAAAGTCATAGCCGGTGCAAGCAAAAACCAGGAGGAAGAGAAGTCAGGCAAGTGGGAGAGCCTGCATGCAGGGAAGGAAAAGCAGAGGAAAGCAGAGGAGCTGGAGGAGGAGCCTTTCACAGAGAGATCCCGAAAGGAGGAACGTGGAGGGTCCAAGAGGAGCGAAAGTGGGCACAGGGGCTTTGTGCCAGAAAAGAATTTCCGGGTGACTGCATACAAGGCGGTCCAGGAGAAAAGTTCATCGCCTCCCCCAAGGAAGACCTCTGAGAGCCGTGACAAGCTGGGAAACAAAGGAGACTTTTCCTCAGGGAAGTCTTCCTTTTCCATTACTCGGGAGGCCCAGGTCAATGTCCGGATGGACTCCTTCGATGAGGACCTTGCACGACCCAGTGGCTTATTGGCTCAGGAACGAAAGCTTTGTCGGGATCTAGTCCATAGCAACAAAAAGGAGCAGGAATTCCGTTCCATTTTCCAGCACATACAGTCAGCTCAGTCGCAGCGTAGCCCCTCAGAATTGTTTGCCCAGCACATAGTGACCATTGTTCATCATGTTAAAGAGCATCACTTTGGATCCTCTGGAATGACATTGCATGAGCGCTTTACTAAATACCTAAAGAGAGGGAATGAACAAGAAGCAGCTAAAACTAAGAAAAGCCCAGAGATACACAGGAGGATAGACATTTCCCCCAGTACATTCAGAAAGCATGGTTTGACTCATGAGGAATTGAAAAGTCCACGGGAACCTGGCTACAAGGCTGAAGGAAAGTACAAAGATGATCCTGTTGATCTTCGCCTTGATATTGAACGCCGTAAAAAACATAAGGAGAGAGATCTTAAGCGAGGTAAATCAAGAGAGTCGGTGGATTCCAGAGACTCTAGCCACTCAAGAGAAAGATCAACTGAAAAGACAGAGAAAACCCACAAAGGATCAAAGAAGCAGAAGAAGCACCGCAGAGCAAGAGACCGGTCTAGGTCCTCCTCGTCCTCTTCCCAGTCATCTCACTCCTACAAAGCAGAGGAGTACCCTGAGGAAGCAGAGGACAGGGAGGAGAGCACCACAGGTTTTGACAAATCCAGATTGGGGACCAAAGACTTTGTGGGTCCGAATGAAAGAGGCGGCAGAGCTCGGGGAACCTTCCAATTTCGAGCAAGAGGGAGAGGTTGGGGCAGAGGAAACTATTCTGGTaacaataacaacaacagcaacaaTGATTTCCAAAAGAGAAGCCGGGAAGAAGAATGGGATCCCGAGTACACACCCAAGAGCAAGAAGTATTACTTGCATGACGACCGGGAAGGCGAGGGCAGCGACAAGTGGATGAGCCGAGGCCGCGGCCGAGGAGCCTTCCCCCGGGGGCGGGGCCGGTTCATGTTCAGGAAATCCAGTACCAGCCCCAAGTGGGCCCATGACAAGTTCAGTGGGGAGGAGGGGGAGATTGAAGACGATGAGAGTGGGACAGAGAACAGAGAAGAAAAGGACAGTTTACAACCTTCAGCTGAGTAGGGGCCACTCTTGATGGAGCCCTTGCCGGGGAGAAAGGCACTGGGAGAGGCTGGTCGAGCTAAACAAGGAGCCTCAAGAAGATCCTGAAAACCCCACCCCACAACCCACTAGCCACACAGAATCCCACTACAGCAGAGTGTGTCCCTGGTGCTGTCTCACTGGACAGGACGCTGCCACCGAGCCTACATCAGGCCCATGTTTCCAGCAGAGCACACTGGGCTCCCGCTGCTGTTTGTGTGGGGTGGGGCAGGGTGGGGAGAAGGATGCGATGCTTGGACTTTGTGTTGGTTTTGTCGTCCCATCCCCACTCCACCCCCAATTAGAAACCAAGTTTTCTTAATTTCATTTCATTTGGAACTAAATGGGAATTTGGTTTTCAATCTCTTCCTGTCCTGAGTTTTTAAAAGTCCTTATATTTTTCTTTTTTCCTTTTTTTTGGGGGGGGGTGGGGGATATGTAGTAATATTAGCATAAAGATTTTAATTTGGGCAACTTTGATTCCTAAGAGAAAACAAAGCATGTGAATAAAAATTGAAGTGTTCACCTCA
>XM_006238867.2
CAGGCGTCGTCGGGGAGCGGGGACGCGGGGCGCGCTATCGGGCGGGGGCGAGGTCCGGGCCGGTTGTGCCGTTGCGAGACTGCAGCTGTAGTCGCTTCGGCCGGTCAAGAGTTATACCCTGACTGTAAATTGGAGAAGCCAGTAGTGCTGCTGGTGTTTTTTTGGAGACAGTTGAAGTTGAATCATTAATTCTAAGGTTTAAACTCTTCCAAGATGTCAAAAACAAACAAATCCAAGTCTGGGTCTCGCTCTTCTCGGTCAAGATCAGCATCCAGATCTCGGTCTCGTTCGTTTTCAAAGTCTCGATCCCGAAGCCGATCTGTCTCTCGTTCAAGGAAGCGCAGGCTGAGTTCTAGGTCTCGTTCCAGATCATACTCTCCAGCTCATAACAGAGAAAGGAATCACCCCAGAGTATATCAGAATCGAGATTTCCGAGGTCACAACAGAGGCTACAGAAGGCCCTATTACTTCCGTGGACGAAACCGAGGCTTTTATCCATGGGGCCAGTATAACCGAGGTGGCTATGGAAATTACCGTTCTAATTGGCAGAACTACCGGCAAGCATACAGCCCTCGTCGGGGCCGATCCCGATCTCGGTCCCCCAAGAGAAGGTCCCCTTCACCAAGGTCCAGGAGCCATTCTAGGAACTCGGATAAGTCATCCTCTGACAGGTCAAGACGTTCTTCGTCCTCCCGGTCGTCCTCCAACCACAGCAGAGTTGAATCATCTAAACGAAAGTCTACAAAAGAGAAAAAGTCCTCTTCCAAGGATAGCCGGCCATCTCAGGCAGCTGGTGATAACCAGGGAGATGAGGCTAAGGAGCAGACATTTTCTGGAGGCACCTCTCAAGATATAAAAGGGTCTGAGAGCTCAAAGCCATGGCCAGATGCTACCACCTATGGCACTGGTTCTGCATCACGGGCCTCGGTTTCTGATCTGAGTCCCCGGGAGAGAAGCCCAGCTCTCAAAAGCCCCCTCCAGTCTGTGGTGGTTAGGCGAAGGTCACCACGCCCTAGCCCTGTGCCCAAACCTAGTCCTCCTCTTTCTAATGCATCCCAGATGGGCTCATCTATGTCAGGCGGTGCTGGATATCAGTCTGGAGCACACCAAGGTCCGTTTGACCATGGCTCTGGGTCTTTGAGTCCATCCAAAAAGAGCCCTGTGGGTAAGAGTCCACCAGCCACTGGCTCTGCATATGGTTCATCTCAGAAAGAGGAGAGCGCTGCTTCGGGAGGAGCAGCCTACACAAAAAGGTATCTGgaagagcagaagacggagaatgggaaggataaggagcagaaacaaacaaatactgataaagagaagctgaaggagaaAGGGGGCTTCTCTGATGCTGATGTCAAAATGAAATCTGATCCATTTGCTCCCAAGACGGACACTGAGAAGCCCTTCCGAGGCAGCCAGTCACCCAAAAGACCCAGTGGCTTATTGGCTCAGGAACGAAAGCTTTGTCGGGATCTAGTCCATAGCAACAAAAAGGAGCAGGAATTCCGTTCCATTTTCCAGCACATACAGTCAGCTCAGTCGCAGCGTAGCCCCTCAGAATTGTTTGCCCAGCACATAGTGACCATTGTTCATCATGTTAAAGAGCATCACTTTGGATCCTCTGGAATGACATTGCATGAGCGCTTTACTAAATACCTAAAGAGAGGGAATGAACAAGAAGCAGCTAAAACTAAGAAAAGCCCAGAGATACACAGGAGGATAGACATTTCCCCCAGTACATTCAGAAAGCATGGTTTGACTCATGAGGAATTGAAAAGTCCACGGGAACCTGGCTACAAGGCTGAAGGAAAGTACAAAGATGATCCTGTTGATCTTCGCCTTGATATTGAACGCCGTAAAAAACATAAGGAGAGAGATCTTAAGCGAGGTAAATCAAGAGAGTCGGTGGATTCCAGAGACTCTAGCCACTCAAGAGAAAGATCAACTGAAAAGACAGAGAAAACCCACAAAGGATCAAAGAAGCAGAAGAAGCACCGCAGAGCAAGAGACCGGTCTAGGTCCTCCTCGTCCTCTTCCCAGTCATCTCACTCCTACAAAGCAGAGGAGTACCCTGAGGAAGCAGAGGACAGGGAGGAGAGCACCACAGGTTTTGACAAATCCAGATTGGGGACCAAAGACTTTGTGGGTCCGAATGAAAGAGGCGGCAGAGCTCGGGGAACCTTCCAATTTCGAGCAAGAGGGAGAGGTTGGGGCAGAGGAAACTATTCTGGTaacaataacaacaacagcaacaaTGATTTCCAAAAGAGAAGCCGGGAAGAAGAATGGGATCCCGAGTACACACCCAAGAGCAAGAAGTATTACTTGCATGACGACCGGGAAGGCGAGGGCAGCGACAAGTGGATGAGCCGAGGCCGCGGCCGAGGAGCCTTCCCCCGGGGGCGGGGCCGGTTCATGTTCAGGAAATCCAGTACCAGCCCCAAGTGGGCCCATGACAAGTTCAGTGGGGAGGAGGGGGAGATTGAAGACGATGAGAGTGGGACAGAGAACAGAGAAGAAAAGGACAGTTTACAACCTTCAGCTGAGTAGGGGCCACTCTTGATGGAGCCCTTGCCGGGGAGAAAGGCACTGGGAGAGGCTGGTCGAGCTAAACAAGGAGCCTCAAGAAGATCCTGAAAACCCCACCCCACAACCCACTAGCCACACAGAATCCCACTACAGCAGAGTGTGTCCCTGGTGCTGTCTCACTGGACAGGACGCTGCCACCGAGCCTACATCAGGCCCATGTTTCCAGCAGAGCACACTGGGCTCCCGCTGCTGTTTGTGTGGGGTGGGGCAGGGTGGGGAGAAGGATGCGATGCTTGGACTTTGTGTTGGTTTTGTCGTCCCATCCCCACTCCACCCCCAATTAGAAACCAAGTTTTCTTAATTTCATTTCATTTGGAACTAAATGGGAATTTGGTTTTCAATCTCTTCCTGTCCTGAGTTTTTAAAAGTCCTTATATTTTTCTTTTTTCCTTTTTTTTGGGGGGGGGTGGGGGATATGTAGTAATATTAGCATAAAGATTTTAATTTGGGCAACTTTGATTCCTAAGAGAAAACAAAGCATGTGAATAAAAATTGAAGTGTTCACCTCAGTTTGGGACCAAACTGCTTGGATCTTTGTACAGCCGGTTTTGTATGTTAAGGAGGAGTTTAAGGCCTTTCTGACCACCTCGTGTCCCCCTTTCTACACAGCCATGTATCACATGGAGTTGCTCCCAGCCTCCCCGTGCACCCTGCTCTTGTCTGACTTCTCCTGGGCTGGGCTTCCCATTCTCACCAGCAGCTCCAGCATCCTGAACTTTGTAGTCCTGCTGGTCTTCAGCAAAAGGAGTGGAAACTGGAGGGCAGTTTCTGGACGGGGTTTTCTAAGAAACTTCTGAATTCTATTATCTTTACAAATATAAGATGAGAAAATAATTTTTTCAATATTTTTTATTAATCTTTTTATAAAATGAAAAGACGCCTATGATTAAGGATGGTGGTTATGGCTGGGTGGTCTGTGGGGTTGTGTGTTTTTGGGTTTTTCCTTTTTTTCTTTTTTAACCTTATGTTTTGGGTTGAAACATTTTCAGATGTTGGGGGGCATTCTCATTAAAGGGTTCTTGTGCTTGCCTTCCGGGGTGGCGTCGCGGTCCCCAGCAGGTGAACCACTGCATCCGTGCATCTGTTGGATACCCACTGCACCCTCCTCCCTCAGCCTTTGCTCTTAGGTTGCCCTGCATACTGCCCTTTACTTTGCTAATTTCAATAGTTAAATTGGTTTTACTTGAATGATTCATGTTTAGGGGAGAGAGAAAAAACACCCTTAAATTTTTGTTTCAACTCCTCCTGCAAATAAAAACAATAAATGAAGTGGCAGATGTAAA