Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Ddx41
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name DEAD-box helicase 41
Also known as -
Coordinate chr17:9631925-9637317
Strand +
Gene summary Predicted to enable DNA binding activity; RNA binding activity; and RNA helicase activity. Predicted to be involved in cell differentiation; cell population proliferation; and mRNA splicing, via spliceosome. Predicted to act upstream of or within cellular response to interferon-beta; defense response to virus; and positive regulation of transcription by RNA polymerase II. Predicted to be located in endoplasmic reticulum and nucleus. Predicted to be part of catalytic step 2 spliceosome. Orthologous to human DDX41 (DEAD-box helicase 41). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ddx41

Retroname Coord Strand Genomic Region ENSG
Ddx41P1 chr6:110159811-110160447 + Intragenic
 N/A UCSC
Ddx41P2 chr6:111545158-111545794 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001108046.2
CTACGATGGAGGAGTCGGAACCCGAGCGGAAGCGGGCTCGCACGAACGAGGCGACTGCGGGTGGGAGCCGCTCCGAGGACGAAGATGAGGACGACGAGGACTACGTGCCCTACGTGCCGTTGCGGCAGCGCCGGCAGCTTCTGCTCCAGAAGCTGCTGCAGCGAAGACGCAAGGGAGCTGCAGAGGAAGAGCAGCAGGACAGTGGCAGTGAGCCCCGAGGAGATGAGGACGACATCCCGCTGGGTCCTCAGTCCAATGTCAGCCTCCTGGATCAGCACCAGCACCTCAAAGAGAAGGCTGAAGCACGCAAGGAGTCCGCCAAGGAAAAGCAACTGAAGGAAGAAGAAAAGATTCTGGAGAGTGTGGCTGAAGGCCGAGCCTTGATGTCAGTGAAGGAAATGGCCAAAGGCATTACCTACGACGATCCAATCAAAACTAGTTGGACACCCCCGCGCTATGTCCTGAGCATGTCAGAAGAGCGGCACGAGCGTGTTCGGAAGAAGTACCACATCCTGGTGGAGGGAGACGGTATCCCGCCACCCATCAAGAGCTTCAAGGAAATGAAGCTCCCTGCAGCTATCCTTCGAGGCCTGAAGAAAAAGGGCATCCTCCACCCAACACCCATTCAGATCCAGGGCATCCCTACCATTCTGTCTGGTCGGGACATGATTGGCATCGCCTTCACGGGGTCAGGCAAGACTCTGGTATTCACACTGCCCGTCATCATGTTCTGCCTGGAACAAGAGAAGCGGTTGCCTTTCTCCAAGCGGGAAGGGCCTTATGGACTTATCATCTGCCCCTCACGAGAGCTGGCTCGGCAGACCCATGGCATCCTGGAGTATTACTGCCGTCTGCTGCAGGAAGACAGCTCCCCTCTCCTGCGCTGCGCACTCTGCATCGGGGGCATGTCGGTGAAGGAGCAGATGGAGACCATCCGACATGGTGTGCACATGATGGTAGCCACACCGGGACGCCTCATGGATTTGCTGCAGAAGAAAATGGTCAGCCTAGACATCTGCCGCTACCTGGCCCTGGATGAGGCTGACCGCATGATCGACATGGGCTTTGAGGGTGACATCCGTACCATCTTCTCCTACTTCAAGGGCCAGCGGCAGACTCTGCTCTTCAGTGCCACCATGCCGAAGAAGATTCAGAACTTCGCCAAGAGCGCCCTGGTCAAGCCTGTCACCATCAATGTTGGTCGTGCTGGAGCAGCCAGCCTTGACGTCATCCAGGAGGTGGAATATGTGAAGGAGGAAGCCAAGATGGTGTACCTGCTTGAGTGCTTGCAGAAGACGCCCCCACCTGTACTCATCTTTGCAGAGAAGAAAGCAGATGTGGATGCCATTCACGAATACCTCCTGCTCAAAGGAGTTGAGGCTGTGGCCATTCATGGGGGCAAAGACCAGGAAGAGCGGACCAAGGCCATTGAGGCATTCCGGGAAGGCAAGAAGGACGTCTTAGTGGCCACGGACGTGGCCTCTAAAGGCCTAGACTTTCCTGCCATCCAGCACGTCATCAACTATGACATGCCTGAAGAAATCGAGAACTATGTGCACCGAATCGGCCGCACTGGGCGCTCAGGAAACACAGGCATTGCCACCACCTTTATCAACAAGGCCTGCGATGAGTCAGTGCTCATGGACCTCAAAGCCTTGCTGCTGGAGGCCAAGCAGAAGGTACCACCTGTTCTGCAAGTGCTGCACTGTGGGGATGAGTCCATGCTGGACATCGGAGGAGAACGGGGCTGCGCCTTCTGTGGAGGCCTTGGTCATCGAATCACTGACTGCCCCAAACTCGAAGCTATGCAGACCAAGCAGGTCAGCAACATTGGCCGCAAGGACTACCTGGCGCACAGCTCCATGGACTTCTGAGCTTCCCTCTTCTCCCCAAGAGTCCAGTCCCAGGACATCAGCCATGTGCACACCAGCCCTCAAGACAAGAAGCCAGCCTCCTTGGCCCAGCTGGCCTGGGCCACCCCAATGCCCCCAAAATTACTATTTTTGTTCTCTTCCCCAGCTGCCATTAAAGCACAATCCCTTTTCTTGGA