Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Spic
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name Spi-C transcription factor
Also known as -
Coordinate chr7:29225721-29233452
Strand -
Gene summary Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in cell differentiation and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within blastocyst development and positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human SPIC (Spi-C transcription factor). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Spic

Retroname Coord Strand Genomic Region ENSG
SpicP3 chr15:83473299-83473998 - Intragenic
 N/A UCSC
SpicP2 chr2:91148121-91149191 + Intergenic
 N/A UCSC
SpicP1 chr1:13017762-13018289 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001108080.1
AACATCGTACTGATATCGCAACATTGTCTTCCTGAACTTGTTATTGAACCCAGAGCCTTGCACAAGCCAGTACGCACGTGCTTACTAGCCGCTGTTTCCTCAACCCAAGACTCTTCAATTCATGAATAATGAACATAGAAATTACATGGCTATCATTAACCCTTATCCTCACATCAGAGGCAATTCTAACTACTGTGGAATGTTACCACCCACAGAGGAACCCCTCTATGACTGGAGAGGTGTAACAAATGGTTCTGCGGACCTGTATTTGGAAGGAAGCTTCCATCAATCCCTACAGAACGTAGCTGAAACCCAGCTGGTACAAGCCCCTTTCTTCCAGGAAAAGGGAGGAAGAGGCAGGAGGAAGCTTCGGCTATTTGAATACCTTTTCGAATCCCTGTGCAATTCGGAGATGGTGTCTTGTATCCAGTGGGTCGACAAAGCCAAAGGCATCTTTCAGTTTATATCAAAAAACAAAGAAAAACTCGCTGAACTCTGGGGGAAAAGAAAAGGCAACCGGAAACCCATGACTTACCAGAAGATGGCCAGAGCCCTGAGGAATTATGCCAGAACTGGGGAGATCACAAAAATCCGGAGAAAGCTGACCTACCAGTTCAGTGAAGCTGTTCTCCAAAGACTTGCTCCGTCTCACTTCCTGGGGAAAGACCTCTTCTACTCACAGTATAAGCAGCCTGATCAGGGCTATCTCAATTTAAACCATTGGAATGCAAATTACTACGCTCACGCCAGTTACCAGAGCTGACATTAGCTTCTTCTTGCCTTGCCAGTGTCAAGAGAGCCCATGCTTTAGGATTTCCAAAGCAAATTGCTTCTCGGTTTTGGGATTCCACACCAGCAAGACAAAAACGCAGAAAGAGAATATATAAACAGGCCATGTTTGGACTTCGCTTGTCCTGACAACTTTTAAGGGCCGACATACTGGTGTTGAAGGGAATGTAGATGTTTCAGAAGCATGCTTCCTGAAGATCACCATTTCTAGTCAACGGGCTCAGTGTCCGTGAATTGGGTATCCAAGAACATCCTGAAGCCAGAATGTCTTCTCAGAAAAATGGGGACACACAGTGGCACTTGGTATTTTTAAATAAACGATTGAATTTGAAGCAACTGAAAAA
>XM_006241223.3
CTTAAAAATAGCTATTTAATGCAACTCTGCCAGGGTGTTGGGGATAGTGAGAGTCCTTAACATCGTACTGATATCGCAACATTGTCTTCCTGAACTTGTTATTGAACCCAGAGCCTTGCACAAGCCAGTACGCACGTGCTTACTAGCCGCTGTTTCCTCAACCCAAGACTCTTCAATTCATGAATAATGACTTGCGTTGAACTGTTTCCACAGACTTTCGTCCAGCAAGACAGCCTGGGCCAAGCATTTGAAGACGCCTTCGAAGTACTGACACAACATTCCACTGGAGAAATGCAGTACCCCCCAGAACATAGAAATTACATGGCTATCATTAACCCTTATCCTCACATCAGAGGCAATTCTAACTACTGTGGAATGTTACCACCCACAGAGGAACCCCTCTATGACTGGAGAGGTGTAACAAATGGTTCTGCGGACCTGTATTTGGAAGGAAGCTTCCATCAATCCCTACAGAACGTAGCTGAAACCCAGCTGGTACAAGCCCCTTTCTTCCAGGAAAAGGGAGGAAGAGGCAGGAGGAAGCTTCGGCTATTTGAATACCTTTTCGAATCCCTGTGCAATTCGGAGATGGTGTCTTGTATCCAGTGGGTCGACAAAGCCAAAGGCATCTTTCAGTTTATATCAAAAAACAAAGAAAAACTCGCTGAACTCTGGGGGAAAAGAAAAGGCAACCGGAAACCCATGACTTACCAGAAGATGGCCAGAGCCCTGAGGAATTATGCCAGAACTGGGGAGATCACAAAAATCCGGAGAAAGCTGACCTACCAGTTCAGTGAAGCTGTTCTCCAAAGACTTGCTCCGTCTCACTTCCTGGGGAAAGACCTCTTCTACTCACAGTATAAGCAGCCTGATCAGGGCTATCTCAATTTAAACCATTGGAATGCAAATTACTACGCTCACGCCAGTTACCAGAGCTGACATTAGCTTCTTCTTGCCTTGCCAGTGTCAAGAGAGCCCATGCTTTAGGATTTCCAAAGCAAATTGCTTCTCGGTTTTGGGATTCCACACCAGCAAGACAAAAACGCAGAAAGAGAATATATAAACAGGCCATGTTTGGACTTCGCTTGTCCTGACAACTTTTAAGGGCCGACATACTGGTGTTGAAGGGAATGTAGATGTTTCAGAAGCATGCTTCCTGAAGATCACCATTTCTAGTCAACGGGCTCAGTGTCCGTGAATTGGGTATCCAAGAACATCCTGAAGCCAGAATGTCTTCTCAGAAAAATGGGGACACACAGTGGCACTTGGTATTTTTAAATAAACGATTGAATTTGAAGCAACTGAAAAAA
>XM_006241224.3
TCCTTAAAAATAGCTATTTAATGCAACTCTGCCAGGGTGTTGGGGATAGTGAGAGTCCTTAACATCGTACTGATATCGCAACATTGTCTTCCTGAACTTGTTATTGAACCCAGAGCCTTGCACAAGCCAGTACGCACGTGCTTACTAGCCGCTGTTTCCTCAACCCAAGACTCTTCAATTCATGAATAATGACTTTCGTCCAGCAAGACAGCCTGGGCCAAGCATTTGAAGACGCCTTCGAAGTACTGACACAACATTCCACTGGAGAAATGCAGTACCCCCCAGAACATAGAAATTACATGGCTATCATTAACCCTTATCCTCACATCAGAGGCAATTCTAACTACTGTGGAATGTTACCACCCACAGAGGAACCCCTCTATGACTGGAGAGGTGTAACAAATGGTTCTGCGGACCTGTATTTGGAAGGAAGCTTCCATCAATCCCTACAGAACGTAGCTGAAACCCAGCTGGTACAAGCCCCTTTCTTCCAGGAAAAGGGAGGAAGAGGCAGGAGGAAGCTTCGGCTATTTGAATACCTTTTCGAATCCCTGTGCAATTCGGAGATGGTGTCTTGTATCCAGTGGGTCGACAAAGCCAAAGGCATCTTTCAGTTTATATCAAAAAACAAAGAAAAACTCGCTGAACTCTGGGGGAAAAGAAAAGGCAACCGGAAACCCATGACTTACCAGAAGATGGCCAGAGCCCTGAGGAATTATGCCAGAACTGGGGAGATCACAAAAATCCGGAGAAAGCTGACCTACCAGTTCAGTGAAGCTGTTCTCCAAAGACTTGCTCCGTCTCACTTCCTGGGGAAAGACCTCTTCTACTCACAGTATAAGCAGCCTGATCAGGGCTATCTCAATTTAAACCATTGGAATGCAAATTACTACGCTCACGCCAGTTACCAGAGCTGACATTAGCTTCTTCTTGCCTTGCCAGTGTCAAGAGAGCCCATGCTTTAGGATTTCCAAAGCAAATTGCTTCTCGGTTTTGGGATTCCACACCAGCAAGACAAAAACGCAGAAAGAGAATATATAAACAGGCCATGTTTGGACTTCGCTTGTCCTGACAACTTTTAAGGGCCGACATACTGGTGTTGAAGGGAATGTAGATGTTTCAGAAGCATGCTTCCTGAAGATCACCATTTCTAGTCAACGGGCTCAGTGTCCGTGAATTGGGTATCCAAGAACATCCTGAAGCCAGAATGTCTTCTCAGAAAAATGGGGACACACAGTGGCACTTGGTATTTTTAAATAAACGATTGAATTTGAAGCAACTGAAAAAA